netcdf4.2及以上版本的安装：For C and Fortran

andrewsoong

destroyer 发表于 2013-12-3 07:45

                               
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楼主是用来做wrf的么？在wrf中不是用不到netcdf3.6.1以后的版本功能么？

wrf啊，我没用这个版本。我用这个酔新版本来支持气候模式CESM

易易猪

当我使用哈佛的那个进行编译时，出现了下面的状况：
configure: netCDF 4.2
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking target system type... i686-pc-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
configure: checking user options
checking whether a NCIO_MINBLOCKSIZE was specified... 256
checking if fsync support is enabled... yes
checking whether extra valgrind tests should be run... no
checking whether we should try to build netCDF-4... no
checking whether reading of HDF4 SD files is to be enabled... no
checking whether to fetch some sample HDF4 files from Unidata ftp site to test HDF4 reading (requires wget)... no
checking whether parallel I/O for classic and 64-bit offset files using parallel-netcdf is to be enabled... no
checking whether extra example tests should be run... no
checking whether parallel IO tests should be run... no
checking whether a default chunk size in bytes was specified... 4194304
checking whether a maximum per-variable cache size for HDF5 was specified... 67108864
checking whether a number of chunks for the default per-variable cache was specified... 10
checking whether a default file cache size for HDF5 was specified... 4194304
checking whether a default file cache maximum number of elements for HDF5 was specified... 1009
checking whether a default cache preemption for HDF5 was specified... 0.75
checking whether netCDF-4 logging is enabled... no
checking whether cdmremote client is to be built... no
checking whether DAP client is to be built... no
checking for style of include used by make... GNU
checking for gcc... gcc
checking whether the C compiler works... no
configure: error: in `/home/luyi/GEOS-Chem-Libraries/src/netcdf-4.2':
configure: error: C compiler cannot create executables
See `config.log' for more details
make[1]: *** [nc_classic] Error 77
make[1]: Leaving directory `/home/luyi/GEOS-Chem-Libraries/src'
make: *** [all] Error 2

请教大神！

andrewsoong

易易猪 发表于 2013-12-4 20:18

                               
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当我使用哈佛的那个进行编译时，出现了下面的状况：
configure: netCDF 4.2
checking build system type. ...

推荐使用intel fortran

易易猪

我又哭了：cdf/include -fpic -mcmodel=medium -MT libnetcdf3_la-nclistmgr.lo -MD -MP -MF .deps/libnetcdf3_la-nclistmgr.Tpo -c nclistmgr.c -o libnetcdf3_la-nclistmgr.o
icc: command line warning #10148: option '-mcmodel=medium' not supported
mv -f .deps/libnetcdf3_la-nclistmgr.Tpo .deps/libnetcdf3_la-nclistmgr.Plo
m4   putget.m4 >putget.c
/bin/bash: m4：找不到命令
make[3]: *** [putget.c] 错误 127
make[3]:正在离开目录 `/home/luyi/GEOS-Chem-Libraries/src/netcdf-4.2/libsrc'
make[2]: *** [check-recursive] 错误 1
make[2]:正在离开目录 `/home/luyi/GEOS-Chem-Libraries/src/netcdf-4.2'
make[1]: *** [nc_classic] 错误 2
make[1]:正在离开目录 `/home/luyi/GEOS-Chem-Libraries/src'
make: *** [all] 错误 2

用的是ifort和icc编译的，但不知道是哪个原因出的错！

易易猪

还有，icc的参数该如何设置呀？

易易猪

libtool: link: icc -fpic -mcmodel=medium -o nctest add.o atttests.o cdftests.o dimtests.o driver.o emalloc.o error.o misctest.o rec.o slabs.o val.o vardef.o varget.o vargetg.o varput.o varputg.o vartests.o vputget.o vputgetg.o  ../liblib/.libs/libnetcdf.a -L/home/luyi/netcdf/lib -lm
icc: command line warning #10148: option '-mcmodel=medium' not supported
../liblib/.libs/libnetcdf.a(libnetcdf3_la-nc.o): In function `NC_endef':
nc.c:(.text+0xf42): undefined reference to `fill_NC_var'
nc.c:(.text+0x105a): undefined reference to `fill_NC_var'
nc.c:(.text+0x11db): undefined reference to `fill_NC_var'
../liblib/.libs/libnetcdf.a(libnetcdf3_la-nc.o): In function `NC_endef..0':
nc.c:(.text+0x1bc4): undefined reference to `fill_NC_var'
nc.c:(.text+0x1cdc): undefined reference to `fill_NC_var'
../liblib/.libs/libnetcdf.a(libnetcdf3_la-nc.o):nc.c:(.text+0x1e5d): more undefined references to `fill_NC_var' follow
../liblib/.libs/libnetcdf.a(libnetcdf3_la-nc3dispatch.o):(.data+0x78): undefined reference to `NC3_get_vara'
../liblib/.libs/libnetcdf.a(libnetcdf3_la-nc3dispatch.o):(.data+0x7c): undefined reference to `NC3_put_vara'
make[4]: *** [nctest] 错误 1
make[4]:正在离开目录 `/home/luyi/GEOS-Chem-Libraries/src/netcdf-4.2/nctest'
make[3]: *** [check-am] 错误 2
make[3]:正在离开目录 `/home/luyi/GEOS-Chem-Libraries/src/netcdf-4.2/nctest'
make[2]: *** [check-recursive] 错误 1
make[2]:正在离开目录 `/home/luyi/GEOS-Chem-Libraries/src/netcdf-4.2'
make[1]: *** [nc_classic] 错误 2
make[1]:正在离开目录 `/home/luyi/GEOS-Chem-Libraries/src'
make: *** [all] 错误 2
%

又出现问题了！我又哭了，不知道原因呀！哈哈

andrewsoong

易易猪 发表于 2013-12-24 12:08

                               
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libtool: link: icc -fpic -mcmodel=medium -o nctest add.o atttests.o cdftests.o dimtests.o driver.o e ...

他们的默认支持 intel fortran 也就是 FC=ifort 就好了~~~icc我没指定，没出问题

易易猪

那你明白我最后的那个问题不？同时，你装的平台是pc还是大型机，用的linux是那个版本？

andrewsoong

易易猪 发表于 2013-12-24 15:54

                               
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那你明白我最后的那个问题不？同时，你装的平台是pc还是大型机，用的linux是那个版本？

大型机~~~小红帽的linux~~~

龙行天下

易易猪 发表于 2013-12-24 12:08

                               
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libtool: link: icc -fpic -mcmodel=medium -o nctest add.o atttests.o cdftests.o dimtests.o driver.o e ...

我安装的过程中也出现这个问题了，请问这个问题你解决了吗？