学习WRFDA安装测试官网观测数据（这里还没有加入辐射数据同化）

任性小王子 · 发表于 2024-11-11 20:31:01

Samantha 发表于 2024-11-11 10:55
按照这个步骤安装的：
tar xzvf netcdf-c-4.7.2.tar.gz
cd netcdf-c-4.7.2

这样安装肯定报错呀

任性小王子 · 发表于 2024-11-11 20:34:16

Samantha 发表于 2024-11-11 10:55
按照这个步骤安装的：
tar xzvf netcdf-c-4.7.2.tar.gz
cd netcdf-c-4.7.2

https://www2.mmm.ucar.edu/wrf/On ... _tutorial.php#STEP1

任性小王子 · 发表于 2024-11-13 10:14:45

本帖最后由任性小王子于 2024-11-13 10:17 编辑

Samantha 发表于 2024-11-11 10:55
按照这个步骤安装的：
tar xzvf netcdf-c-4.7.2.tar.gz
cd netcdf-c-4.7.2

1. 安装zlib
./configure --prefix=$DIR/grib2
make
make install

2. 安装jasper
./configure --prefix=$DIR/grib2
make
make install

3. 安装libpng
./configure --prefix=$DIR/grib2
make
make install
export LDFLAGS="-L$DIR/grib2/lib"
export CPPFLAGS="-I$DIR/grib2/include"
export JASPERINC=$DIR/grib2/include
export JASPERLIB=$DIR/grib2/lib

4. 安装hdf5
./configure --prefix=$DIR/hdf5 --enable-fortran --with-zlib=$DIR/grib2
make
make install

5. 安装netcdf-c
CPPFLAGS="-I$DIR/hdf5/include" LDFLAGS="-L$DIR/hdf5/lib" ./configure --prefix=$DIR/netcdf --disable-dap
make
make install

6. 安装netcdf-fortran
./configure --prefix=$DIR/netcdf CPPFLAGS="-I$DIR/netcdf/include" LDFLAGS="-L$DIR/netcdf/lib"
make
make install
四、配置bashrc
# for all software
export DIR=/home/changmh/apps

# for hdf5
export LD_LIBRARY_PATH=$DIR/hdf5/lib:$LD_LIBRARY_PATH

# for netcdf
export NETCDF=$DIR/netcdf
export PATH=$NETCDF/bin:$PATH
export LD_LIBRARY_PATH=$NETCDF/lib:$LD_LIBRARY_PATH

# for openmpi(这个库直接用安装好的，搜一下which mpirun/mpich)
export PATH=$DIR/mpich/bin:$PATH

# for grib2

export JASPERINC=$DIR/grib2/include
export JASPERLIB=$DIR/grib2/lib

希望对你有帮助

Samantha · 发表于 2025-2-19 08:51:12

任性小王子发表于 2024-11-13 10:14
1. 安装zlib
./configure --prefix=$DIR/grib2
make

感谢楼主！抱歉这么晚才回复，之前我试过了是我们服务器问题无法安装，只能生成四个exe文件。最近我们新增加了超算账号，试着按照楼主方法又安装了一遍，出来了十几个exe，估计还是并行带不起来的原因吧

任性小王子 · 发表于 2025-2-19 11:22:45

Samantha 发表于 2025-2-19 08:51
感谢楼主！抱歉这么晚才回复，之前我试过了是我们服务器问题无法安装，只能生成四个exe文件。最近我们新 ...

可以把你的编译文件，搜索一下第一error发个截图看一看

Samantha · 发表于 2025-2-19 12:17:47

任性小王子发表于 2025-2-19 11:22
可以把你的编译文件，搜索一下第一error发个截图看一看

da_wrf_interfaces.f(157): error #7002: Error in opening the compiled module file.  Check INCLUDE paths. [DA_MODULE_DOMAIN]
      use da_module_domain, only : domain
------------^
da_wrf_interfaces.f(158): error #6406: Conflicting attributes or multiple declaration of name. [DOMAIN]
      type(domain), pointer :: grid
-------------^
da_wrf_interfaces.f(157): error #6580: Name in only-list does not exist or is not accessible. [DOMAIN]
      use da_module_domain, only : domain
-------------------------------------^
da_wrf_interfaces.f(204): error #7002: Error in opening the compiled module file.  Check INCLUDE paths. [DA_MODULE_DOMAIN]
      use da_module_domain, only : domain
-------------^
da_wrf_interfaces.f(205): error #7002: Error in opening the compiled module file.  Check INCLUDE paths. [DA_MODULE_CONFIGURE]
      use da_module_configure, only : grid_config_rec_type
-------------^
da_wrf_interfaces.f(206): error #6457: This derived type name has not been declared. [DOMAIN]
      type (domain),             intent(in) :: grid
---------------^
da_wrf_interfaces.f(207): error #6406: Conflicting attributes or multiple declaration of name. [GRID_CONFIG_REC_TYPE]
      type (grid_config_rec_type), intent(in) :: config_flags
---------------^
da_wrf_interfaces.f(204): error #6580: Name in only-list does not exist or is not accessible. [DOMAIN]
      use da_module_domain, only : domain
--------------------------------------^
da_wrf_interfaces.f(205): error #6580: Name in only-list does not exist or is not accessible. [GRID_CONFIG_REC_TYPE]
      use da_module_configure, only : grid_config_rec_type
-----------------------------------------^
compilation aborted for da_wrf_interfaces.f (code 1)

任性小王子 · 发表于 2025-2-19 15:40:35

本帖最后由任性小王子于 2025-2-19 15:41 编辑

Samantha 发表于 2025-2-19 12:17
da_wrf_interfaces.f(157): error #7002: Error in opening the compiled module file. Check INCLUDE p ...

库的头文件的问题呐，可以把编译的文件第一个error的内容往前取一下，我看看

Samantha · 发表于 2025-2-19 17:05:31

任性小王子发表于 2025-2-19 15:40
库的头文件的问题呐，可以把编译的文件第一个error的内容往前取一下，我看看

make[1]: 进入目录“/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/var/build”
da.make:316: warning: overriding recipe for target `da_update_bc.o'
da.make:309: warning: ignoring old recipe for target `da_update_bc.o'
makefile:58: warning: overriding recipe for target `.f90.o'
../../configure.wrf:412: warning: ignoring old recipe for target `.f90.o'
make[1]: “depend”是最新的。
make[1]: 离开目录“/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/var/build”
make[1]: 进入目录“/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/var/build”
da.make:316: warning: overriding recipe for target `da_update_bc.o'
da.make:309: warning: ignoring old recipe for target `da_update_bc.o'
makefile:58: warning: overriding recipe for target `.f90.o'
../../configure.wrf:412: warning: ignoring old recipe for target `.f90.o'
rm -f da_control.o
/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/tools/standard.exe da_control.f90 > da_control.b
rm -f da_wrf_interfaces.o
/lib/cpp -P -nostdinc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DDA_CORE=1 -DWRFPLUS=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=8 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_FUNC  -DWRF_USE_CLM -DUSE_NETCDF4_FEATURES -DWRFIO_NCD_LARGE_FILE_SUPPORT -DBUFR -DFFTPACK -DNORESHAPE -DDM_PARALLEL -DNETCDF -DCRTM -DHDF5 -DVAR4D -DLANDREAD_STUB=1 -DUSE_ALLOCATABLES -Dwrfmodel -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DBUILD_RRTMG_FAST=0 -DBUILD_RRTMK=0 -DBUILD_SBM_FAST=0 -DSHOW_ALL_VARS_USED=0 -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0  -I. -traditional-cpp -DUSE_NETCDF4_FEATURES -DWRFIO_NCD_LARGE_FILE_SUPPORT -I/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/inc da_control.b  > da_control.f
/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/tools/standard.exe da_wrf_interfaces.f90 > da_wrf_interfaces.b
/lib/cpp -P -nostdinc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DDA_CORE=1 -DWRFPLUS=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=8 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_FUNC  -DWRF_USE_CLM -DUSE_NETCDF4_FEATURES -DWRFIO_NCD_LARGE_FILE_SUPPORT -DBUFR -DFFTPACK -DNORESHAPE -DDM_PARALLEL -DNETCDF -DCRTM -DHDF5 -DVAR4D -DLANDREAD_STUB=1 -DUSE_ALLOCATABLES -Dwrfmodel -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DBUILD_RRTMG_FAST=0 -DBUILD_RRTMK=0 -DBUILD_SBM_FAST=0 -DSHOW_ALL_VARS_USED=0 -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0  -I. -traditional-cpp -DUSE_NETCDF4_FEATURES -DWRFIO_NCD_LARGE_FILE_SUPPORT -I/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/inc da_wrf_interfaces.b  > da_wrf_interfaces.f
rm -f da_control.b
rm -f da_wrf_interfaces.b
COMPILING da_control.f90 for 4DVAR
COMPILING da_wrf_interfaces.f90 for 4DVAR
if fgrep -iq '!$OMP' da_wrf_interfaces.f ; then \
      if [ -n "" ] ; then echo COMPILING da_wrf_interfaces.f90 WITH OMP ; fi ; \
  time mpif90 -f90=ifort -o da_wrf_interfaces.o -c -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -r8       -real-size `expr 8 \* 8` -i4 da_wrf_interfaces.f ; \
      else \
      if [ -n "" ] ; then echo COMPILING da_wrf_interfaces.f90 WITHOUT OMP ; fi ; \
  time mpif90 -f90=ifort -o da_wrf_interfaces.o -c -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -r8       -real-size `expr 8 \* 8` -i4 da_wrf_interfaces.f ; \
      fi
da_wrf_interfaces.f(157): error #7002: Error in opening the compiled module file.  Check INCLUDE paths. [DA_MODULE_DOMAIN]
      use da_module_domain, only : domain
------------^
da_wrf_interfaces.f(158): error #6406: Conflicting attributes or multiple declaration of name. [DOMAIN]
      type(domain), pointer :: grid

Samantha · 发表于 2025-2-20 09:01:43

任性小王子发表于 2025-2-19 15:40
库的头文件的问题呐，可以把编译的文件第一个error的内容往前取一下，我看看

还有想请教楼主一个WRFDA的问题。就是我在做地面观测数据前处理的时候，下载了区域范围内的数据处理成littleR格式的，执行./obsproc.exe后显示所有数据在区域外，但是数据显示都读入进去了，检查了namelist.obsproc和namelist.wps的区域设置是相同的，想问下楼主可能是哪里出问题了呢？
namelist.wps如下：
&share
wrf_core          = 'ARW'
max_dom             = 2
start_date          = '2023-07-09_00:00:00','2023-07-09_00:00:00'
end_date          = '2023-07-19_00:00:00','2023-07-19_00:00:00'
interval_seconds    = 21600
io_form_geogrid    = 2
debug_level       = 0
/

&geogrid
parent_id          = 1, 1
parent_grid_ratio = 1, 3
i_parent_start    = 1, 160
j_parent_start    = 1, 130
e_we                = 304, 304
e_sn                = 304, 304
geog_data_res       = 'default','default'
dx                = 9000
dy                = 9000
map_proj          = 'lambert'
ref_lat             = 38
ref_lon             = 89
truelat1          = 39
truelat2          = 41
stand_lon          = 89
geog_data_path    = '/lza/g1/xbrcnwp/MODEL/WPS_GEOG'
/

&ungrib
out_format          = 'WPS'
prefix             = 'FILE'
/

&metgrid
fg_name             = 'FILE','GFSFILE'
io_form_metgrid    = 2
/

namelist.obsproc如下：
&record1
obs_gts_filename = 'fort.2023070906',
obs_err_filename = 'obserr.txt',
FG_FORMAT = 'LITTLE_R',
gts_from_mmm_archive = .false.,
/

&record2
time_window_min  = '2023-07-09_05:45:00',
time_analysis = '2023-07-09_06:00:00',
time_window_max  = '2023-07-09_06:15:00',
/

&record3
max_number_of_obs       = 400000,
fatal_if_exceed_max_obs  = .TRUE.,
/

&record4
qc_test_vert_consistency = .TRUE.,
qc_test_convective_adj = .TRUE.,
qc_test_above_lid       = .TRUE.,
remove_above_lid       = .false.,
domain_check_h          = .true.,
Thining_SATOB          = .false.,
Thining_SSMI          = .false.,
Thining_QSCAT          = .false.,
calc_psfc_from_qnh    = .true.,
/

&record5
print_gts_read          = .TRUE.,
print_gpspw_read       = .TRUE.,
print_recoverp          = .TRUE.,
print_duplicate_loc    = .TRUE.,
print_duplicate_time    = .TRUE.,
print_recoverh          = .TRUE.,
print_qc_vert          = .TRUE.,
print_qc_conv          = .TRUE.,
print_qc_lid          = .TRUE.,
print_uncomplete       = .TRUE.,
/

&record6
ptop =  5000.0,
base_pres    = 100000.0,
base_temp    = 290.0,
base_lapse    = 50.0,
base_strat_temp = 215.0,
base_tropo_pres = 20000.0
/

&record7
IPROJ = 1,
PHIC  = 38,
XLONC = 89,
TRUELAT1= 39,
TRUELAT2= 41,
MOAD_CEN_LAT = 38,
STANDARD_LON = 89,
/

&record8
IDD = 1,
MAXNES = 1,
NESTIX =  304,
NESTJX =  304,
DIS =  9,
NUMC = 1,
NESTI  = 1,
NESTJ  = 1,
/

&record9
PREPBUFR_OUTPUT_FILENAME = 'prepbufr_output_filename',
PREPBUFR_TABLE_FILENAME = 'prepbufr_table_filename',
OUTPUT_OB_FORMAT = 2
use_for       = '3DVAR',
num_slots_past = 3,
num_slots_ahead  = 3,
write_synop = .true.,
write_ship  = .true.,
write_metar = .true.,
write_buoy  = .true.,
write_pilot = .true.,
write_sound = .true.,
write_amdar = .true.,
write_satem = .true.,
write_satob = .true.,
write_airep = .true.,
write_gpspw = .true.,
write_gpsztd= .true.,
write_gpsref= .true.,
write_gpseph= .true.,
write_ssmt1 = .true.,
write_ssmt2 = .true.,
write_ssmi  = .true.,
write_tovs  = .true.,
write_qscat = .true.,
write_profl = .true.,
write_bogus = .true.,
write_airs  = .true.,
/
&RECORD10
WIND_SD = T,
WIND_SD_SYNOP = T,
WIND_SD_SHIPS = F,
WIND_SD_METAR = F,
WIND_SD_BUOY = F,
WIND_SD_SOUND = F,
WIND_SD_QSCAT = F,
WIND_SD_PILOT = F,
WIND_SD_AIREP = F,
WIND_SD_GEOAMV  = F,
WIND_SD_TAMDAR  = F,
WIND_SD_PROFILER       = F
/

任性小王子 · 发表于 2025-2-20 16:45:00

Samantha 发表于 2025-2-19 17:05
make[1]: 进入目录“/public/home/gscma_test/NewEnergy/WRF/model/yanwj/WRFPLUS/var/build”
da.make: ...

抱歉这么晚回复，export WRFPLUS_DIR=${your_source_code_dir}/WRFPLUS，这个执行了吗？再试一下编译，如果还有问题，把你的compile.out文件再给我发一下，我看一看。

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