求助帖，安装wrf时报错，找不到-lhdf5_fortran

egabi

新手气象研究，在编译wrf时输入./configure时出现如下错误
checking for perl5... no
checking for perl... found /usr/bin/perl (perl)
Will use NETCDF in dir: /data/home/yrf/CMAQ/LIB/netcdf_combined
Will use HDF5 in dir: /data/home/yrf/CMAQ/LIB/netcdf_combined
PHDF5 not set in environment. Will configure WRF for use without.
Will use 'time' to report timing information
$JASPERLIB or $JASPERINC not found in environment, configuring to build without grib2 I/O...



同时在./compile em_real编译后出现如下错误
df5 -lm -lz
ld: cannot find -lhdf5_fortran
0.26user 0.17system 0:00.43elapsed 100%CPU (0avgtext+0avgdata 26280maxresident)k
0inputs+104outputs (0major+50387minor)pagefaults 0swaps
make[1]: [em_real] Error 1 (ignored)



以下是我的环境设置，烦请大家帮我解答一下
# .bashrc

# Source global definitions
if [ -f /etc/bashrc ]; then
        . /etc/bashrc
fi

# For CMAQ
module load compiler/intel/intel-compiler-2017.5.239
module load mpi/mpich/intel/3.2
module list

source /data/home/yrf/WRF-test/config.sh

# intel
export CC=icc
export CXX=icpc
export FC=ifort
export F77=ifort
export CFLAGS=-m64
export FFLAGS=-m64

export LIB=/data/home/yrf/CMAQ/LIB

#zlib
export ZLIB=${LIB}/netcdf_combined
export LD_LIBRARY_PATH=${ZLIB}/lib:$LD_LIBRARY_PATH
export INCLUDE=${ZLIB}/include:$INCLUDE
#hdf5
export HDF5=${LIB}/netcdf_combined
export PATH=${HDF5}/bin:$PATH
export LD_LIBRARY_PATH=${HDF5}/lib:$LD_LIBRARY_PATH
export INCLUDE=${HDF5}/include:$INCLUDE
#netcdf
export NETCDF=${LIB}/netcdf_combined
export PATH=${NETCDF}/bin:$PATH
export LD_LIBRARY_PATH=${NETCDF}/lib:$LD_LIBRARY_PATH
export INCLUDE=${NETCDF}/include:$INCLUDE

egabi

补充一下，这是安装WRF的库


export SOFT_DIR=/data/home/wanglong/software
export HDF=${SOFT_DIR}/hdf
export NETCDF=${SOFT_DIR}/netcdf
export IOAPI=${SOFT_DIR}/ioapi
export JASPER=${SOFT_DIR}/jasper
export ZLIB=${SOFT_DIR}/zlib
export LIBPNG=${SOFT_DIR}/libpng
export MPI=${SOFT_DIR}/mpich

export PATH=${MPI}/bin:${IOAPI}/bin:${NETCDF}/bin:${HDF}/bin:$PATH
export LD_LIBRARY_PATH=${MPI}/lib:${IOAPI}/lib:${NETCDF}/lib:${ZLIB}/lib:${LIBPNG}/lib:${JASPER}/lib:${HDF}/lib:$LD_LIBRARY_PATH
export LD_RUN_PATH=${MPI}/lib:${IOAPI}/lib:${NETCDF}/lib:${ZLIB}/lib:${LIBPNG}/lib:${JASPER}/lib:${HDF}/lib:${LD_RUN_PATH}

export FC=ifort
export CC=icc
export CXX=icpc

Lancelot

有点好奇哪篇教程教的是写-lhdf5_fortran

任性小王子

egabi 发表于 2024-11-4 09:07
补充一下，这是安装WRF的库

已经提示你$JASPERLIB or $JASPERINC not found in environment，所以你的应该是export JASPERLIB=${SOFT_DIR}/jasper，其它的一概不识别。
所以楼主多注意手册上的环境变量。