WRF、MEGAN以及CMAQ答疑帖

qq531884069

Paternoster 发表于 2022-4-23 10:01
您好！想请问一下，我在运行CCTM的时候，报错显示为：排放清单文件的 var_desc 属性有问题无法读取
Error  ...

你可以下载CMAQ benchmark数据里的排放文件 然后ncdump -h来进行对比

问题少女

qq531884069 发表于 2022-4-22 03:16
你找错了方向
这些是化学机制的物种  你应该去找对应机制的文章而不是去MEGAN的页面找
https://acp.cop ...

收到，谢谢楼主，太感谢楼主啦，给我指明了方向

Paternoster

qq531884069 发表于 2022-4-23 15:28
你可以下载CMAQ benchmark数据里的排放文件 然后ncdump -h来进行对比

谢谢楼主！发现问题了

Paternoster

楼主，俺想请教一个tracer相关的问题

我在cmaq里添加了惰性的物种作为tracer，但是最后CONC结果显示这个物种在所有网格上的值都是1.0000e-30，排放清单里这个物种的排放量也是不小的，是哪里出了问题呢

qq531884069

Paternoster 发表于 2022-4-29 10:37
楼主，俺想请教一个tracer相关的问题

我在cmaq里添加了惰性的物种作为tracer，但是最后CONC结果显示这个 ...

你还需要修改相关设置来允许tracer emit以及transport

YYHHHY

楼主，俺想请教个问题，我在编译MEGAN2.1v的时候执行完./make_all_programs.scr 64bit，报错如下，我用的pgi编译器，一直有无法添加符号的错误，问题出在什么地方呢？
Removing *.o
Make all programs
pgfortran -c -O -Mbyteswapio -Mextend -Mlfs -Msecond_underscore -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src met2mgn.f
pgfortran -c -O -Mextend -Mlfs -Msecond_underscore -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src readpar.f
NVFORTRAN-S-0188-Argument number 3 to open3: type mismatch (readpar.f: 331)
  0 inform,   0 warnings,   1 severes, 0 fatal for readpar
make: *** [makefile:31：readpar.o] 错误 2
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Bstatic_pgi -Mlfs -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/TXT2IOAPI/INCLDIR -c -o parsline.o parsline.f
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Bstatic_pgi -Mlfs -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/TXT2IOAPI/INCLDIR -c -o checkmem.o checkmem.f
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Bstatic_pgi -Mlfs -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/TXT2IOAPI/INCLDIR -c -o cnvt_efs.o cnvt_efs.F
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Bstatic_pgi -Mlfs -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/TXT2IOAPI/INCLDIR -c -o cnvt_pft.o cnvt_pft.F
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Bstatic_pgi -Mlfs -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/TXT2IOAPI/INCLDIR -c -o cnvt_lai.o cnvt_lai.F
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Bstatic_pgi -Mlfs -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/TXT2IOAPI/INCLDIR -c -o txt2ioapi.o txt2ioapi.F
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Bstatic_pgi -Mlfs -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/TXT2IOAPI/INCLDIR -o txt2ioapi parsline.o checkmem.o cnvt_efs.o cnvt_pft.o cnvt_lai.o txt2ioapi.o -L/home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort -lioapi -L/usr/local/netcdf4-needed/lib -lnetcdff -lnetcdf
/usr/bin/ld: /home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort/libioapi.a(ckdesc3.o): undefined reference to symbol '_gfortran_transfer_real_write@@GFORTRAN_8'
//usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/libgfortran.so.5: 无法添加符号: DSO missing from command line
make: *** [makefile:25：txt2ioapi] 错误 2
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR gamma_etc.f
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR checkmem.f
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR canopy.f
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR solarangle.f
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR findlai.f
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR soilnox_fx.F
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR soilnox.F
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR emproc.F
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/EMPROC/INCLDIR -o emproc gamma_etc.o checkmem.o canopy.o solarangle.o findlai.o soilnox_fx.o soilnox.o emproc.o -L/home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort -lioapi -L/usr/local/netcdf4-needed/lib -lnetcdff -lnetcdf
/usr/bin/ld: /home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort/libioapi.a(ckdesc3.o): undefined reference to symbol '_gfortran_transfer_real_write@@GFORTRAN_8'
//usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/libgfortran.so.5: 无法添加符号: DSO missing from command line
make: *** [makefile:39：emproc] 错误 2
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/MGN2MECH/INCLDIR checkmem.f
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/MGN2MECH/INCLDIR growseason.f
pgfortran -c -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/MGN2MECH/INCLDIR mgn2mech.F
pgfortran -O -Mvect=sse -Mextend -Msecond_underscore -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -I/usr/local/netcdf4-needed/include -I/home/linuxprobe/MEGANv2.10/src/MGN2MECH/INCLDIR -o mgn2mech checkmem.o growseason.o mgn2mech.o -L/home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort -lioapi -L/usr/local/netcdf4-needed/lib -lnetcdff -lnetcdf
/usr/bin/ld: /home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort/libioapi.a(ckdesc3.o): undefined reference to symbol '_gfortran_transfer_real_write@@GFORTRAN_8'
//usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/libgfortran.so.5: 无法添加符号: DSO missing from command line
make: *** [makefile:34：mgn2mech] 错误 2
pgfortran -O2 -Mdalign -Mnoframe -byteswapio -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -c -o ioapi2uam.o ioapi2uam.f
pgfortran -O2 -Mdalign -Mnoframe -byteswapio -Mlfs -Bstatic_pgi -I/home/linuxprobe/download/ioapi3322/ioapi-3.2/ioapi/fixed_src -o ioapi2uam ioapi2uam.o -L/home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort -lioapi -L/usr/local/netcdf4-needed/lib -lnetcdff -lnetcdf
/usr/bin/ld: /home/linuxprobe/download/ioapi3322/ioapi-3.2/Linux2_x86_64gfort/libioapi.a(ckdesc3.o): undefined reference to symbol '_gfortran_transfer_real_write@@GFORTRAN_8'
//usr/lib/gcc/x86_64-redhat-linux/8/../../../../lib64/libgfortran.so.5: 无法添加符号: DSO missing from command line
make: *** [makefile:18：ioapi2uam] 错误 2
Create symbolic links

Paternoster

楼主，我在运行CCTM的时候，log文件报错为：

ERROR: Max number of EBI time step reductions exceeded
      Convergence failure for cell ( 78,  63,   2)
      Convergence failure for the following species:Init.Conc, Pred.Conc.
          NO2                2.1334E-03   8.0532E+20 ppmV
          NO                 2.5636E-04   1.2088E+07 ppmV
          O3                 3.8098E-02   1.3917E-24 ppmV
          NO3                1.4516E-06   1.2094E-33 ppmV
          ..........

     *** ERROR ABORT in subroutine HRSOLVER on PE 002        
     ERROR: Stopping because of EBI convergence failures
PM3EXIT:  DTBUF 0:00:00   Jan. 1, 2017  

没碰到过这个报错，确实不知道是哪里的问题，还望楼主指点！

qq531884069

Paternoster 发表于 2022-4-30 15:59
楼主，我在运行CCTM的时候，log文件报错为：

ERROR: Max number of EBI time step reductions exceeded
...

EBI convergence failures报错是迭代的时候出错了
把max timestep缩小到180或者120看看

qq531884069

YYHHHY 发表于 2022-4-29 14:37
楼主，俺想请教个问题，我在编译MEGAN2.1v的时候执行完./make_all_programs.scr 64bit，报错如下，我用的pg ...

MEGAN2.1的源码里有非常多不规范的fortran语法   你可能得自己修正下   我当初改了好几天。。。包括makefile里

bandaoshutiao

帅哥你好！！我遇到一个问题，自己尝试解决半个多月了，实在无力了，想来请教一下！！
我最近在编译WRF-CMAQ，我可以单独编译成功cctm.533.exe，也可以单独编译WRF和WPS
但是在编译耦合模型时，最后生成wrf.exe的时候报错（其他exe都可以做出来）
是不是和我config的设置有关呢
我对编译不是太懂