CESM1.2.0移植过程中$case.build出错，请大家帮忙分析

andrewsoong

fascism 发表于 2013-10-18 11:45

                               
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那奇怪了啊，我就用的这个命令下载的，我一会再看看。好像这次netcdf lib弄对了

我的CESM1.2.0 压缩之后是98M左右~~~

fascism

andrewsoong 发表于 2013-10-18 12:32

                               
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我的CESM1.2.0 压缩之后是98M左右~~~

EXEROOT下面可执行文件已经生成了，应该模型没啥问题

infocert

很明显，你是netCDF LIBRARY设置有问题，你就在环境变量里设置LD_LIBRARY_PATH变量，指明netCDF的lib目录及hdf5的lib目录

fascism

infocert 发表于 2013-11-18 00:24

                               
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很明显，你是netCDF LIBRARY设置有问题，你就在环境变量里设置LD_LIBRARY_PATH变量，指明netCDF的lib目录及 ...

非常感谢，最近已经弄出来了。原因是netcdf4.3里面，Fortran lab 和C lab是分开的，想办法装在一起就行啦。再次感谢您的帮助。

龙行天下

fascism 发表于 2013-11-23 03:49

                               
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非常感谢，最近已经弄出来了。原因是netcdf4.3里面，Fortran lab 和C lab是分开的，想办法装在一起就行啦 ...

前辈你好，请问你能不能把你的netcdf安装方法给我发一下，我最近也是卡在netcdf这个坎过不去了，不胜感激

棉花糖heyuan

SVN 下载CESM1_2_0是出现 REPORT of '/!svn/vcc/default': Could not read response body，是什么原因？

彭小清

版主移植成功了   有时间可以出来回答一些问题啊   ~~~~

彭小清

[guser002@login test2]$ ./test2.build
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
-------------------------------------------------------------------------
CESM BUILDNML SCRIPT STARTING
- To prestage restarts, untar a restart.tar file into /public3/home/external/gansu/guser002/model/cesm1_2_0/run/test2
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
module: Command not found.
infile is /public3/home/external/gansu/guser002/model/cesm1_2_0/scripts/test2/Buildconf/cplconf/cesm_namelist
CLM configure done.
CLM adding use_case 2000_control defaults for var sim_year with val 2000
CLM adding use_case 2000_control defaults for var sim_year_range with val constant
CLM adding use_case 2000_control defaults for var use_case_desc with val Conditions to simulate 2000 land-use
CESM BUILDNML SCRIPT HAS FINISHED SUCCESSFULLY
-------------------------------------------------------------------------
-------------------------------------------------------------------------
CESM PRESTAGE SCRIPT STARTING
- Case input data directory, DIN_LOC_ROOT, is /public3/home/external/gansu/guser002/model/cesm1_2_0/inputdata
- Checking the existence of input datasets in DIN_LOC_ROOT

The following files were not found, this is informational only
Input Data List Files Found:
/public3/home/external/gansu/guser002/model/cesm1_2_0/scripts/test2/Buildconf/cpl.input_data_list
/public3/home/external/gansu/guser002/model/cesm1_2_0/scripts/test2/Buildconf/datm.input_data_list
/public3/home/external/gansu/guser002/model/cesm1_2_0/scripts/test2/Buildconf/clm.input_data_list
/public3/home/external/gansu/guser002/model/cesm1_2_0/scripts/test2/Buildconf/rtm.input_data_list
File status unknown: I2000CN_f19_g16_c100503.clm2.r.2000-01-01-00000.nc
File status unknown: I2000CN_f19_g16_c100503.rtm.r.2000-01-01-00000.nc

CESM PRESTAGE SCRIPT HAS FINISHED SUCCESSFULLY
-------------------------------------------------------------------------
-------------------------------------------------------------------------
CESM BUILDEXE SCRIPT STARTING
COMPILER is intel
- Build Libraries: mct gptl pio csm_share
Mon Dec 22 20:49:28 CST 2014 /public3/home/external/gansu/guser002/model/cesm1_2_0/run/mct/mct.bldlog.141222-204909
Mon Dec 22 20:49:51 CST 2014 /public3/home/external/gansu/guser002/model/cesm1_2_0/run/gptl/gptl.bldlog.141222-204909
Mon Dec 22 20:49:52 CST 2014 /public3/home/external/gansu/guser002/model/cesm1_2_0/run/pio/pio.bldlog.141222-204909
ERROR: buildlib.pio failed, see /public3/home/external/gansu/guser002/model/cesm1_2_0/run/pio/pio.bldlog.141222-204909
ERROR: cat /public3/home/external/gansu/guser002/model/cesm1_2_0/run/pio/pio.bldlog.141222-204909


打开这个pio.bldlog.141222-204909显示的内容如下
Mon Dec 22 20:49:52 CST 2014 /public3/home/external/gansu/guser002/model/cesm1_2_0/run/pio/pio.bldlog.141222-204909
Copying source to CCSM EXEROOT...
PIO already built. Checking machine type
Same machine.
cp: cannot stat `Makefile.conf.old': No such file or directory
cp: cannot stat `Makefile.conf': No such file or directory
Makefile:25: Makefile.conf: No such file or directory
gmake: *** No rule to make target `Makefile.conf'.  Stop.

彭小清

在移植的过程中[guser002@login Machines]$ vi env_mach_specific.pxq 这个文件时，有一个不明白的设置的地方是这个
module switch cray-mpich2 /public3/home/external/gansu/guser002/software/mpich2-1.5-intel
module switch cray-libsci /public3/home/external/gansu/guser002/software/zlib-1.2.8
module load /public3/home/external/gansu/guser002/software/netcdf-4.2
module load cmake/2.8.10.1
最后这个cmake确实是没有设置，不知道怎么设置这个东西  请指教

leyutianzi

楼主 麻烦问下问题解决了么 我遇到了同样的问题  netcdf4.1.3 和 3.6.3 貌似都不行