CLM4.5地表数据生成

彭小清

在CLM4.5中创建地表数据报错：（请各位的指导）

[guser002@login mkmapdata]$ export GRIDNAME=1x1_boulderCO
[guser002@login mkmapdata]$ export CDATE='date +150108'
[guser002@login mkmapdata]$ ./mknoocnmap.pl -p 40,255 -n $GRIDNAME

Create SCRIP grid and mapping files for a single-point
Create land SCRIP gridfile
Execute: env S_LAT=39.95 W_LON=254.95 N_LAT=40.05 E_LON=255.05 NX=1 NY=1 PTNAME=1x1_boulderCO   GRIDFILE=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc ncl mkscripgrid.ncl
Copyright (C) 1995-2014 - All Rights Reserved
University Corporation for Atmospheric Research
NCAR Command Language Version 6.2.0
The use of this software is governed by a License Agreement.
See http://www.ncl.ucar.edu/ for more details.
Create ocean SCRIP gridfile
Execute: env S_LAT=39.95 W_LON=254.95 N_LAT=40.05 E_LON=255.05 NX=1 NY=1 PTNAME=1x1_boulderCO   GRIDFILE=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc IMASK=0 ncl mkscripgrid.ncl
Copyright (C) 1995-2014 - All Rights Reserved
University Corporation for Atmospheric Research
NCAR Command Language Version 6.2.0
The use of this software is governed by a License Agreement.
See http://www.ncl.ucar.edu/ for more details.
Create unity mapping file between the two gridfile
Execute: env GRIDFILE1=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc GRIDFILE2=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc MAPFILE=map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.nc  ncl /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapdata/mkunitymap.ncl
Copyright (C) 1995-2014 - All Rights Reserved
University Corporation for Atmospheric Research
NCAR Command Language Version 6.2.0
The use of this software is governed by a License Agreement.
See http://www.ncl.ucar.edu/ for more details.

Successfully created grid/mapping files for single-point

[guser002@login mkmapdata]$ ls
createXMLEntries.pl                                                  mkunitymap.ncl            regridbatch.sh
map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.nc  mvNimport.sh              rmdups.ncl
mkmapdata.sh                                                         PET0.RegridWeightGen.Log
mknoocnmap.pl                                                        README

[guser002@login mkmapdata]$ export CSMDATA=/public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata
[guser002@login mkmapdata]$ export ESMFBIN_PATH=/public3/home/external/gansu/guser002/software/esmf-6.3.0/bin/binO/Linux.intel.64.mpiuni.default
[guser002@login mkmapdata]$ export MY_ESMF_REGRID=/public3/home/external/gansu/guser002/software/esmf-6.3.0/bin/binO/Linux.intel.64.mpiuni.default/ESMF_RegridWeightGen
[guser002@login mkmapdata]$ export GRIDFILE=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
[guser002@login mkmapdata]$ ./mkmapdata.sh -r $GRIDNAME -f $GRIDFILE -t regional

./mkmapdata.sh
Script to create mapping files required by mksurfdata_map
query command is ./../../../bld/queryDefaultNamelist.pl -silent -namelist clmexp -phys clm4_5  -justvalue -options sim_year=2000 -csmdata /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata
Using user specified scrip grid file: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
Output grid resolution is 1x1_boulderCO
Machine login NOT recognized
Creating mapping file: map_0.5x0.5_AVHRR_to_1x1_boulderCO_nomask_aave_da_c150108.nc
From input grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappingdata/grids/SCRIPgrid_0.5x0.5_AVHRR_c110228.nc
For output grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc

Skipping creation of map_0.5x0.5_AVHRR_to_1x1_boulderCO_nomask_aave_da_c150108.nc as already exists
Creating mapping file: map_0.5x0.5_MODIS_to_1x1_boulderCO_nomask_aave_da_c150108.nc
From input grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappingdata/grids/SCRIPgrid_0.5x0.5_MODIS_c110228.nc
For output grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc

Skipping creation of map_0.5x0.5_MODIS_to_1x1_boulderCO_nomask_aave_da_c150108.nc as already exists
Creating mapping file: map_3x3min_LandScan2004_to_1x1_boulderCO_nomask_aave_da_c150108.nc
From input grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappingdata/grids/SCRIPgrid_3minx3min_LandScan2004_c120517.nc
For output grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc

Starting weight generation with these inputs:
   Source File:
/public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappin
gdata/grids/SCRIPgrid_3minx3min_LandScan2004_c120517.nc
   Destination File:
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
   Weight File:
map_3x3min_LandScan2004_to_1x1_boulderCO_nomask_aave_da_c150108.nc
   Source File is in SCRIP format
   Source Grid is a global grid
   Source Grid is a logically rectangular grid
   Destination File is in SCRIP format
   Destination Grid is a regional grid
   Destination Grid is a logically rectangular grid
   Regrid Method: conserve
   Pole option: NONE
   Ignore unmapped destination points
   Output weight file in 64bit offset NetCDF file format
   Norm Type: dstarea

./mkmapdata.sh: line 106: 13372 Segmentation fault      (core dumped) ${cmd}
Error status returned from mkmapdata script


[guser002@login gen_domain_files]$ export OCNDOM=domain.ocn_noocean.nc
[guser002@login gen_domain_files]$ export ATMDOM domain.lnd.1x1_boulderCO_noocean.nc
[guser002@login gen_domain_files]$ export ATMDOM=domain.lnd.1x1_boulderCO_noocean.nc
[guser002@login gen_domain_files]$ ./gen_domain -m $MAPFILE -o $OCNDOM -l $ATMDOM

fmap   =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapdata/map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.n
c
fn1_out_ocn= domain.ocn.domain.ocn_noocean.nc.150108.nc
fn2_out_lnd=
domain.lnd.domain.lnd.1x1_boulderCO_noocean.nc_domain.ocn_noocean.nc.150108.nc
fn2_out_ocn=
domain.ocn.domain.lnd.1x1_boulderCO_noocean.nc_domain.ocn_noocean.nc.150108.nc
usercomment= null
eps    =   9.999999960041972E-013
fminval=   1.000000047497451E-003
fmaxval=    1.00000000000000     
set_fv_pole_yc =            0
  
input SCRIP data...
pole_fix =  F
  
input file  =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapdata/map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.n
c
open
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapdata/map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.n
c
domain_a     =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc
domain_b     =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
grid_file_ocn=
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc
grid_file_atm=
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
n,nv,ni,nj,na,ns=            1           4           1           1           1
           1
  
output domain data...
nf =            1
create domain.ocn.domain.ocn_noocean.nc.150108.nc
write domain.ocn.domain.ocn_noocean.nc.150108.nc
(shr_sys_getenv) ERROR: no implementation of getenv for this architecture
(shr_sys_getenv) no implementation of getenv for this machine

frinly

正在学习呢，谢谢楼主雪中送火

彭小清

frinly 发表于 2015-1-8 16:57
正在学习呢，谢谢楼主雪中送火

好吧   有没有创建地表数据啊，求交流~~~

dreamfly_ykf

学习一下，很有用好处

彭小清

dreamfly_ykf 发表于 2015-1-8 17:05
学习一下，很有用好处

看一哈  这个错误怎么解决的啊 谢啦

zpxie

楼主在兰州超算上转啊，以后多交流哈。

zpxie

楼主  我碰到了跟你一样的问题 请问你是怎么解决的。

旅行的沙丁鱼

CLM4.5做surface data我会。你这种情况是节点内存不足进程被kill，请用并行方法运行mkmapdata

hubert

旅行的沙丁鱼 发表于 2015-2-9 10:35
CLM4.5做surface data我会。你这种情况是节点内存不足进程被kill，请用并行方法运行mkmapdata

你会转clm4.5？能否教一下?

servicewangyuqi

老看到大家说创建地表数据，具体是什么意思捂脸ing