结果无法生成最后一个文件 map_1km-merge-10min_HYDRO1K-merge-nomask_to_144x45_NH_nomask_aave_da_c170410.nc
错误信息如下:
./mkmapdata.sh: line 106: 22861 Killed ${cmd}
ld: cannot find -lnetcdff
make: *** [../gen_domain] Error 1
./creat_surfdata-NH.sh: line 46: ./gen_domain: No such file or directory
make: /gpfsnewhome/wangch4/Software/netcdf4.1.3-intel-netcdf4/lib/../bin/nf-config: Command not found
make: Warning: File `/gpfsnewhome/wangch4/Kongy/cesm1_2_0/models/lnd/clm/tools/clm4_5/mksurfdata_map/src/Depends' has modification time 1.2e+03 s in the future
make: warning: Clock skew detected. Your build may be incomplete.
gmake: /gpfsnewhome/wangch4/Software/netcdf4.1.3-intel-netcdf4/lib/../bin/nf-config: Command not found
Makefile.common:365: /gpfsnewhome/wangch4/Kongy/cesm1_2_0/models/lnd/clm/tools/clm4_5/mksurfdata_map/src/Depends: No such file or directory
gmake: /gpfsnewhome/wangch4/Software/netcdf4.1.3-intel-netcdf4/lib/../bin/nf-config: Command not found
gmake: Warning: File `../mksurfdata_map' has modification time 1.2e+03 s in the future
gmake: warning: Clock skew detected. Your build may be incomplete.
ERROR: mapping file for this resolution does NOT exist (../../shared/mkmapdata/map_1km-merge-10min_HYDRO1K-merge-nomask_to_144x45_NH_nomask_aave_da_c170410.nc).
rm: cannot remove `nodelist': No such file or directory
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Creating mapping file: map_1km-merge-10min_HYDRO1K-merge-nomask_to_144x45_NH_nomask_aave_da_c170410.nc
From input grid: /gpfsnewdata/wangch4/Yangk/data/inputdata/lnd/clm2/mappingdata/grids/UGRID_1km-merge-10min_HYDRO1K-merge-nomask_c130402.nc
For output grid: /gpfsnewhome/wangch4/Kongy/cesm1_2_0/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_144x45_NH_nomask_c170410.nc
Starting weight generation with these inputs:
Source File:
/gpfsnewdata/wangch4/Yangk/data/inputdata/lnd/clm2/mappingdata/grids/UGRID_1km-
merge-10min_HYDRO1K-merge-nomask_c130402.nc
Destination File:
/gpfsnewhome/wangch4/Kongy/cesm1_2_0/models/lnd/clm/tools/shared/mkmapgrids/SCR
IPgrid_144x45_NH_nomask_c170410.nc
Weight File:
map_1km-merge-10min_HYDRO1K-merge-nomask_to_144x45_NH_nomask_aave_da_c170410.nc
Source File is in UGRID format, dummy variable: landmesh
Source Grid is a global grid
Source Grid is an unstructured grid
Destination File is in SCRIP format
Destination Grid is a regional grid
Destination Grid is a logically rectangular grid
Regrid Method: conserve
Pole option: NONE
Ignore unmapped destination points
Output weight file in NetCDF4 file format
Norm Type: dstarea
Error status returned from mkmapdata script
/gpfsnewhome/wangch4/Kongy/cesm1_2_0/scripts/ccsm_utils/Machines/config_compilers.xml intel linuxintel
Successfully created auxilary build files for linuxintel
最后一个文件成功生成了,还是数组越界的问题。 最新错误:ld: cannot find -lnetcdff
make: *** [../gen_domain] Error 1
./creat_surfdata-NH.sh: line 46: ./gen_domain: No such file or directory
make: /gpfsnewhome/wangch4/Software/netcdf4.1.3-intel-netcdf4/lib/../bin/nf-config: Command not found
gmake: /gpfsnewhome/wangch4/Software/netcdf4.1.3-intel-netcdf4/lib/../bin/nf-config: Command not found
Makefile.common:365: /gpfsnewhome/wangch4/Kongy/cesm1_2_0/models/lnd/clm/tools/clm4_5/mksurfdata_map/src/Depends: No such file or directory
gmake: /gpfsnewhome/wangch4/Software/netcdf4.1.3-intel-netcdf4/lib/../bin/nf-config: Command not found forrtl: severe (408): fort: (2): Subscript #1 of the array LONC has value 125599448 which is greater than the upper bound of 125599447
******************
进行到这一步出错的:
Attempting to make elevation .....
domain_read_dims_2d read lon and lat dims from lsmlon/lsmlat
domain_read initialized domain
Open elevation file:
/gpfsnewdata/wangch4/Yangk/data/inputdata/lnd/clm2/rawdata/topodata_10min_USGS_
071205.nc
(gridmap_map_read) reading mapping matrix data...
(gridmap_map_read) * file name : ../../shared/mkmapdata/map_10x10min_nomask_to_144x45_NH_nomask_aave_da_c170412.nc
* matrix dimensions rows x cols : 2332800 x 6480
* number of non-zero elements: 1261440
domain_clean: cleaning 2332800
Successfully made elevation
Attempting to make Topography statistics.....
domain_read_dims_1d read 1-d length from num_pixels
domain_read initialized domain
(gridmap_map_read) reading mapping matrix data...
(gridmap_map_read) * file name : ../../shared/mkmapdata/map_1km-merge-10min_HYDRO1K-merge-nomask_to_144x45_NH_nomask_aave_da_c170412.nc
* matrix dimensions rows x cols : 125599447 x 6480
* number of non-zero elements: 34432104