CMAQ的CCTM运行出错

3Esperanza

前面都运行成功了，到CCTM输出文件都没有，是空的，不知道是哪地方出错了，请大神们帮忙看看
Compiler is set to gcc

model       CCTM_v52.exe;

repo        /home/CMAQ/CMAQ_REPO/CCTM/src;
s
mechanism   cb6r3_ae6_aq;

lib_base    /home/CMAQ/lib_basedir/x86_64/gcc4.8.5;

lib_1       ioapi/modules;

lib_2       ioapi/include;

lib_3       mpi/lib;


lib_4       ioapi/lib;

cpp_flags   " -Dparallel  -DSUBST_BARRIER=SE_BARRIER -DSUBST_GLOBAL_MAX=SE_GLOBAL_MAX -DSUBST_GLOBAL_MIN=SE_GLOBAL_MIN -DSUBST_GLOBAL_MIN_DATA=SE_GLOBAL_MIN_DATA -DSUBST_GLOBAL_TO_LOCAL_COORD=SE_GLOBAL_TO_LOCAL_COORD -DSUBST_GLOBAL_SUM=SE_GLOBAL_SUM -DSUBST_GLOBAL_LOGICAL=SE_GLOBAL_LOGICAL -DSUBST_LOOP_INDEX=SE_LOOP_INDEX -DSUBST_SUBGRID_INDEX=SE_SUBGRID_INDEX -DSUBST_HI_LO_BND_PE=SE_HI_LO_BND_PE -DSUBST_SUM_CHK=SE_SUM_CHK -DSUBST_INIT_ARRAY=SE_INIT_ARRAY -DSUBST_COMM=SE_COMM -DSUBST_MY_REGION=SE_MY_REGION -DSUBST_SLICE=SE_SLICE -DSUBST_GATHER=SE_GATHER -DSUBST_DATA_COPY=SE_DATA_COPY -DSUBST_IN_SYN=SE_IN_SYN";

f_compiler  mpif90;

fstd        "-O3 -funroll-loops -finit-character=32 -Wtabs -Wsurprising";

dbg         "-Wall -O0 -g -fcheck=all -ffpe-trap=invalid,zero,overflow -fbacktrace";

f_flags     "-ffixed-form -ffixed-line-length-132 -funroll-loops -finit-character=32";

f90_flags   "-ffree-form -ffree-line-length-none -funroll-loops -finit-character=32";

c_compiler  gcc;

c_flags     "-O2 -DFLDMN -I";

link_flags  "-openmp";

ioapi       "-lioapi";     

netcdf      "-lnetcdf -lnetcdff";

mpich       "-lmpi -pthread ";

include SUBST_PE_COMM    ./PE_COMM.EXT;
include SUBST_CONST      ./CONST.EXT;
include SUBST_FILES_ID   ./FILES_CTM.EXT;
include SUBST_EMISPRM    ./EMISPRM.EXT;

// Parallel / Include message passing definitions
include SUBST_MPI        ./mpif.h;

// options are stenex or se_noop
Module STENEX/se;
// parallel executable; stenex and pario included
Module PARIO;

// options are par, par_nodistr and par_noop
Module par/mpi;

// options are wrf and yamo
Module driver/wrf;

// options are cartesian
Module grid/cartesian;

// options are yamo
Module init/yamo;

// options are gencoor_wrf and gencoor
Module couple/gencoor_wrf;

// options are yamo
Module hadv/yamo;

// options are wrf and yamo
Module vadv/wrf;

// options are multiscale
Module hdiff/multiscale;

// options are acm2
Module vdiff/acm2;

// options are m3dry
Module depv/m3dry;

// options are emis
Module emis/emis;

// options are beis3
Module biog/beis3;

// options are smoke
Module plrise/smoke;

// options are cgrid_spcs_nml and cgrid_spcs_icl
Module spcs/cgrid_spcs_nml;

// options are inline and table
Module phot/inline;

//  gas chemistry solvers
// options are smvgear, ros3, and ebi_<mech>; see 'gas chemistry mechanisms' for <mech>
Module gas/ebi_cb6r3_ae6_aq;

//  gas chemistry mechanisms
// options are cb05e51_ae6_aq, cb05e51_ae6nvPOA_aq, cb05eh51_ae6_aq, cb05mp51_ae6_aq, cb05tucl_ae6_aq, cb05tump_ae6_aq, cb6r3_ae6_aq, cb6r3_ae6nvPOA_aq, racm2_ae6_aq, saprc07tb_ae6_aq, saprc07tc_ae6_aq, saprc07tc_ae6nvPOA_aq, saprc07tic_ae6i_aq, saprc07tic_ae6i_aqkmti, saprc07tic_ae6invPOA_aq
Module MECHS/cb6r3_ae6_aq;

//  tracer modules
// options are trac0, trac1
Module MECHS/trac0;
// options are aero6
Module aero/aero6;

// options are acm_ae6, acm_ae6_kmt, and acm_ae6_mp
Module cloud/acm_ae6;

// compile for inline process analysis
Module procan/pa;

// options are util
Module util/util;


setenv WORKDIR /home/CMAQ/CMAQ_REPO/CCTM/scripts
setenv OUTDIR /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH
setenv INPDIR /home/CMAQ/data/SE52BENCH/single_day/cctm_input
setenv LOGDIR /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/LOGS
setenv NMLpath /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5
setenv NEW_START TRUE
set START_DATE = 2011-07-01
set END_DATE = 2011-07-01
set STTIME = 000000
set NSTEPS = 240000
set TSTEP = 010000
setenv NPCOL_NPROW 1 1
set NPROCS = 1
set NZ = 35
setenv GRID_NAME SE52BENCH
setenv GRIDDESC /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDDESC
setenv AVG_CONC_SPCS ALL
setenv ACONC_BLEV_ELEV  1 1
setenv AVG_FILE_ENDTIME N
setenv EXECUTION_ID CCTM_v52.exe
setenv CTM_MAXSYNC 300
setenv CTM_MINSYNC 60
setenv SIGMA_SYNC_TOP 0.7
setenv CTM_ADV_CFL 0.95
setenv CTM_WB_DUST Y
setenv CTM_ERODE_AGLAND Y
setenv CTM_WBDUST_BELD BELD3
setenv CTM_LTNG_NO Y
setenv CTM_WVEL Y
setenv KZMIN Y
setenv CTM_ILDEPV Y
setenv CTM_MOSAIC N
setenv CTM_FST N
setenv CTM_ABFLUX Y
setenv CTM_HGBIDI N
setenv CTM_SFC_HONO Y
setenv CTM_GRAV_SETL Y
setenv CTM_BIOGEMIS Y
setenv CTM_PT3DEMIS Y
setenv CTM_ZERO_PCSOA N
setenv CTM_PROCAN N
setenv PA_BCOL_ECOL 10 320
setenv PA_BROW_EROW 10 195
setenv PA_BLEV_ELEV 1  4
setenv IOAPI_LOG_WRITE F
setenv FL_ERR_STOP N
setenv PROMPTFLAG F
setenv IOAPI_OFFSET_64 NO
setenv CTM_EMISCHK N
setenv CTM_AVISDIAG Y
setenv CTM_PMDIAG Y
setenv CTM_APMDIAG Y
setenv APMDIAG_BLEV_ELEV 1 3
setenv APMDIAG_BLEV_ELEV
setenv CTM_CKSUM Y
setenv CLD_DIAG Y
setenv CTM_AERDIAG Y
setenv CTM_PHOTDIAG Y
setenv CTM_SSEMDIAG Y
setenv CTM_DUSTEM_DIAG Y
setenv CTM_DEPV_FILE Y
setenv VDIFF_DIAG_FILE Y
setenv LTNGDIAG Y
setenv CTM_AOD Y
setenv B3GTS_DIAG Y
setenv PT3DDIAG N
setenv PT3DFRAC N
setenv REP_LAYER_MIN -1
set DISP = delete
set ICpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc
set BCpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc
set EMISpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/gridded_area
set IN_PTpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point
set IN_LTpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/lightning
set METpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip
set OMIpath = /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5
set LUpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land
set SZpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land
set ICBC_CASE = 2013ef_v6_13g_s07
set EMIS_CASE = 2013ef_v6_13g_s07_hg
set TODAYG = 2011-07-01
set TODAYJ = `date -ud "${START_DATE}" +%Y%j`
date -ud 2011-07-01 +%Y%j
set STOP_DAY = `date -ud "${END_DATE}" +%Y%j`
date -ud 2011-07-01 +%Y%j
while ( 2011182 < = 2011182 )
set YYYYMMDD = `date -ud "${TODAYG}" +%Y%m%d`
date -ud 2011-07-01 +%Y%m%d
set YYMMDD = `date -ud "${TODAYG}" +%y%m%d`
date -ud 2011-07-01 +%y%m%d
set YYYYJJJ = 2011182
set YESTERDAY = `date -ud "${TODAYG}-1days" +%Y%m%d`
date -ud 2011-07-01-1days +%Y%m%d
if ( TRUE == true || TRUE == TRUE ) then
setenv ICFILE ICON_20110630_bench.nc
setenv INITIAL_RUN Y
rm: No match.
mkdir -p /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH
else
set BCFILE = BCON_20110701_bench.nc
set OMIfile = OMI_1979_to_2015.dat
set OPTfile = PHOT_OPTICS.dat
setenv GRID_BDY_2D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDBDY2D_110701.nc
setenv GRID_CRO_2D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDCRO2D_110701.nc
setenv GRID_CRO_3D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDCRO3D_110701.nc
setenv GRID_DOT_2D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDDOT2D_110701.nc
setenv MET_CRO_2D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO2D_110701.nc
setenv MET_CRO_3D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO3D_110701.nc
setenv MET_DOT_3D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/METDOT3D_110701.nc
setenv MET_BDY_3D /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/METBDY3D_110701.nc
setenv LAYER_FILE /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO3D_110701.nc
if ( Y == N ) then
set STKCASEG = 12US1_2011ek_cb6cmaq_v6_11g
set STKCASEE = 12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g
set EMISfile = emis_mole_all_20110701_cb6_bench.nc
setenv NPTGRPS 5
setenv STK_GRPS_01 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_ptnonipm_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_02 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_ptegu_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_03 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_othpt_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_04 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_ptfire_20110701_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_05 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_pt_oilgas_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv LAYP_STTIME 000000
setenv LAYP_NSTEPS 240000
setenv STK_EMIS_01 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/ptnonipm/inln_mole_ptnonipm_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_02 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/ptegu/inln_mole_ptegu_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_03 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/othpt/inln_mole_othpt_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_04 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/ptfire/inln_mole_ptfire_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_05 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/inln_point/pt_oilgas/inln_mole_pt_oilgas_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv LAYP_STDATE 2011182
endif
if ( Y == Y ) then
setenv LTNGNO InLine
setenv USE_NLDN Y
if ( Y == Y ) then
setenv NLDN_STRIKES /home/CMAQ/data/SE52BENCH/single_day/cctm_input/lightning/NLDN.12US1.20110701_bench.nc
else
setenv LTNGPARMS_FILE /home/CMAQ/data/SE52BENCH/single_day/cctm_input/lightning/LTNG_AllParms_12US1_bench.nc
endif
if ( Y == Y ) then
set IN_BEISpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land
set GSPROpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land
setenv GSPRO /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/gspro_biogenics_1mar2017.txt
setenv B3GRD /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/b3grd_bench.nc
setenv BIOG_SPRO B10C6
setenv BIOSW_YN Y
setenv BIOSEASON /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/bioseason.cmaq.2011_12US1_wetland100.ghrsst_bench.ncf
setenv SUMMER_YN Y
setenv PX_VERSION Y
setenv SOILINP /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110630.nc
endif
if ( Y == Y ) then
setenv DUST_LU_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/beld3_12US1_459X299_output_a_bench.nc
setenv DUST_LU_2 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/beld4_12US1_459X299_output_tot_bench.nc
setenv MODIS_FPAR /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/modis_bench.nc
if ( Y == Y ) then
setenv CROPMAP01 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/BeginPlanting_12km_bench.nc
setenv CROPMAP04 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/EndPlanting_12km_bench.nc
setenv CROPMAP08 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/EndHarvesting_12km_bench.nc
endif
endif
setenv OCEAN_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/12US1_surf_bench.nc
if ( Y == Y ) then
setenv E2C_Soilfile /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/2011_US1_soil_bench.nc
setenv E2C_Fertfile /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/2011_US1_time20110701_bench.nc
setenv B4LU_file /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/beld4_12kmCONUS_2006nlcd_bench.nc
setenv E2C_SOIL /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/2011_US1_soil_bench.nc
setenv E2C_FERT /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/2011_US1_time20110701_bench.nc
setenv BELD4_LU /home/CMAQ/data/SE52BENCH/single_day/cctm_input/land/beld4_12kmCONUS_2006nlcd_bench.nc
endif
setenv CTM_APPL v52_gcc4.8.5_SE52BENCH_20110701
setenv S_CGRID /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CGRID_v52_gcc4.8.5_SE52BENCH_20110701.nc
setenv CTM_CONC_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv A_CONC_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_ACONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv MEDIA_CONC /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_MEDIA_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_DRY_DEP_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DRYDEP_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_DEPV_DIAG /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPV_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_PT3D_DIAG /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PT3D_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv B3GTS_S /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_B3GTS_S_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv SOILOUT /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110701.nc
setenv CTM_WET_DEP_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_WET_DEP_2 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_VIS_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_AVIS_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_PMDIAG_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_APMDIAG_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_RJ_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_RJ_2 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_SSEMIS_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SSEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_DUST_EMIS_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DUSTEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_IPR_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_IPR_2 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_IPR_3 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_3_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_IRR_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_IRR_2 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_IRR_3 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_3_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_DRY_DEP_MOS /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_DRY_DEP_FST /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDFST_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_DEPV_MOS /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVFST_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_DEPV_FST /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_VDIFF_DIAG /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VDIFF_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_VSED_DIAG /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VSED_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_AOD_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_AOD_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_LTNGDIAG_1 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGHRLY_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv CTM_LTNGDIAG_2 /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGCOL_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
setenv FLOOR_FILE /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/FLOOR_v52_gcc4.8.5_SE52BENCH_20110701.txt
if ( ! -d /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH ) mkdir -p /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH
set log_test = `ls CTM_LOG_???.${CTM_APPL}`
ls: No match.
set OUT_FILES = ( /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/FLOOR_v52_gcc4.8.5_SE52BENCH_20110701.txt /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CGRID_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_ACONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_MEDIA_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DRYDEP_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPV_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PT3D_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_B3GTS_S_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SSEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DUSTEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_3_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_3_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDFST_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVFST_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VDIFF_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VSED_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_AOD_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGHRLY_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGCOL_v52_gcc4.8.5_SE52BENCH_20110701.nc -v )
set OUT_FILES = `echo $OUT_FILES | sed "s; -v;;g" `
sed s; -v;;g
echo /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/FLOOR_v52_gcc4.8.5_SE52BENCH_20110701.txt /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CGRID_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_ACONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_MEDIA_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DRYDEP_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPV_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PT3D_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_B3GTS_S_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SSEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DUSTEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_3_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_1_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_2_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_3_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDFST_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVFST_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VDIFF_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VSED_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_AOD_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGHRLY_v52_gcc4.8.5_SE52BENCH_20110701.nc -v /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGCOL_v52_gcc4.8.5_SE52BENCH_20110701.nc -v
echo /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/FLOOR_v52_gcc4.8.5_SE52BENCH_20110701.txt /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CGRID_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_ACONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_MEDIA_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DRYDEP_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPV_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PT3D_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_B3GTS_S_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SSEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DUSTEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_3_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_3_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDFST_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVFST_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VDIFF_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VSED_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_AOD_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGHRLY_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGCOL_v52_gcc4.8.5_SE52BENCH_20110701.nc
/home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/FLOOR_v52_gcc4.8.5_SE52BENCH_20110701.txt /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CGRID_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_ACONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_MEDIA_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DRYDEP_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPV_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PT3D_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_B3GTS_S_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SSEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DUSTEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_3_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_3_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDFST_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVFST_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VDIFF_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VSED_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_AOD_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGHRLY_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGCOL_v52_gcc4.8.5_SE52BENCH_20110701.nc
set out_test = `ls $OUT_FILES`
ls /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/FLOOR_v52_gcc4.8.5_SE52BENCH_20110701.txt /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CGRID_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_ACONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_MEDIA_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DRYDEP_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPV_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PT3D_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_B3GTS_S_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SSEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DUSTEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_3_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_1_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_2_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_3_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDFST_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVFST_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VDIFF_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VSED_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_AOD_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGHRLY_v52_gcc4.8.5_SE52BENCH_20110701.nc /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGCOL_v52_gcc4.8.5_SE52BENCH_20110701.nc
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/FLOOR_v52_gcc4.8.5_SE52BENCH_20110701.txt: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CGRID_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_ACONC_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_MEDIA_CONC_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DRYDEP_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPV_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PT3D_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_B3GTS_S_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SOILOUT_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP1_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_WETDEP2_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMVIS_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_APMDIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG1_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PHOTDIAG2_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_SSEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DUSTEMIS_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_1_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_2_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_PA_3_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_1_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_2_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_IRR_3_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DDFST_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVFST_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_DEPVMOS_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VDIFF_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_VSED_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_AOD_DIAG_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGHRLY_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
ls: cannot access /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/CCTM_LTNGCOL_v52_gcc4.8.5_SE52BENCH_20110701.nc: No such file or directory
if ( delete == delete ) then
echo  ancillary log files being deleted
ancillary log files being deleted
foreach file ( )
echo  output files being deleted
output files being deleted
foreach file ( )
else
setenv CTM_STDATE 2011182
setenv CTM_STTIME 000000
setenv CTM_RUNLEN 240000
setenv CTM_TSTEP 010000
setenv EMIS_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/emis/gridded_area/emis_mole_all_20110701_cb6_bench.nc
setenv INIT_GASC_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv INIT_AERO_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv INIT_NONR_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv INIT_TRAC_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv BNDY_GASC_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv BNDY_AERO_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv BNDY_NONR_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv BNDY_TRAC_1 /home/CMAQ/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv OMI /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/OMI_1979_to_2015.dat
setenv OPTICS_DATA /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/PHOT_OPTICS.dat
set TR_DVpath = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip
set TR_DVfile = /home/CMAQ/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO2D_110701.nc
setenv gc_matrix_nml /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/GC_cb6r3_ae6_aq.nml
setenv ae_matrix_nml /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/AE_cb6r3_ae6_aq.nml
setenv nr_matrix_nml /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/NR_cb6r3_ae6_aq.nml
setenv tr_matrix_nml /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/Species_Table_TR_0.nml
setenv CSQY_DATA /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/CSQY_DATA_cb6r3_ae6_aq
if ( ! ( -e /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/CSQY_DATA_cb6r3_ae6_aq ) ) then
if ( ! ( -e /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/PHOT_OPTICS.dat ) ) then
ls -l /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/CCTM_v52.exe
-rwxr-xr-x. 1 root root 9882336 Jun  1 01:41 /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/CCTM_v52.exe
size /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/CCTM_v52.exe
   text           data            bss            dec            hex        filename
5332874        4196932        76474944        86004750        520540e        /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/CCTM_v52.exe
date
Fri Jun  8 05:00:38 CST 2018
mpirun -r ssh -np 1 /home/CMAQ/CMAQ_REPO/CCTM/scripts/BLD_CCTM_v52_gcc4.8.5/CCTM_v52.exe
[mpiexec@localhost.localdomain] match_arg (utils/args/args.c:159): unrecognized argument r
[mpiexec@localhost.localdomain] HYDU_parse_array (utils/args/args.c:174): argument matching returned error
[mpiexec@localhost.localdomain] parse_args (ui/mpich/utils.c:1596): error parsing input array
[mpiexec@localhost.localdomain] HYD_uii_mpx_get_parameters (ui/mpich/utils.c:1648): unable to parse user arguments
[mpiexec@localhost.localdomain] main (ui/mpich/mpiexec.c:153): error parsing parameters
0.000u 0.000s 0:00.00 0.0%        0+0k 0+0io 0pf+0w
date
Fri Jun  8 05:00:38 CST 2018
if ( ! -e /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/LOGS ) then
mkdir /home/CMAQ/data/output_CCTM_v52_gcc4.8.5_SE52BENCH/LOGS
endif
mv: No match.
setenv NEW_START false
set TODAYG = `date -ud "${TODAYG}+1days" +%Y-%m-%d`
date -ud 2011-07-01+1days +%Y-%m-%d
set TODAYJ = `date -ud "${TODAYG}" +%Y%j`
date -ud 2011-07-02 +%Y%j
end
while ( 2011183 < = 2011182 )
exit


谢谢！

3Esperanza

感觉是并行的问题啊

3Esperanza

mpirun的command修改  直接mpirun &BLD/$EXEC，可以跑起来，但出错了：
*** ERROR ABORT in subroutine PT3D_INIT
     Could not open file "STK_EMIS_01".

3Esperanza

为什么我的STK_EMIS_01文件就是一个路径呢？

3Esperanza

对比了下5.2之前下的数据和最新的数据，发现STK_EMIS_01对应的文件名不对，重新改了下就好了

pcc

楼主是跑通了吗？

pcc

能再说的具体点吗？我的问题跟你的一毛一样

3Esperanza

pcc 发表于 2019-11-18 08:36
能再说的具体点吗？我的问题跟你的一毛一样

时间太久已经忘了具体的了 我这个问题就是STK_EMIS_01的文件名和之前下载的数据文件名不同，改了之后就跑通了

pcc

那mpirun 也是要改吗？

3Esperanza

pcc 发表于 2019-11-18 09:53
那mpirun 也是要改吗？

好像不用吧