CMAQ-5.2 benchmark CCTM死活跑不通

pcc

可不可以给大神看看我这个到底出在哪里了错误。

pcc

#!/bin/csh -f

# ==================== CCTMv5.2.1 Run Script ========================
# Usage: run.cctm >&! cctm_v52b.log &                                
#
# To report problems or request help with this script/program:     
#             http://www.epa.gov/cmaq    (EPA CMAQ Website)
#             http://www.cmascenter.org  (CMAS Website)
# ===================================================================  

# ===================================================================
#> Runtime Environment Options
# ===================================================================

#> Choose compiler and set up CMAQ environment with correct
#> libraries using config.cmaq. Options: intel | gcc | pgi
if ( ! $?compiler ) then
   setenv compiler gcc
endif

#> Source the config.cmaq file to set the build environment
cd ../..
source ../CMAQ-5.2.1/config_cmaq.csh $compiler
cd CCTM/scripts

#> Set General Parameters for Configuring the Simulation
set VRSN      = v521            #> Code Version
set PROC      = mpi               #> serial or mpi
set MECH      = cb05e51_ae6_aq      #> Mechanism ID
set EMIS      = 2013ef            #> Emission Inventory Details
set APPL      = SE52BENCH         #> Application Name (e.g. Gridname)
                                                      
#> Define RUNID as any combination of parameters above or others. By default,
#> this information will be collected into this one string, $RUNID, for easy
#> referencing in output binaries and log files as well as in other scripts.
setenv RUNID  ${VRSN}_${compilerString}_${APPL}

#> Set the build directory (this is where the CMAQ executable
#> is located by default).
set BLD      = ${CMAQ_HOME}/CCTM/scripts/BLD_CCTM_${VRSN}_${compilerString}
set EXEC     = CCTM_${VRSN}.exe  
cat $BLD/CCTM_${VRSN}.cfg; echo "    "; set echo

#> Set Working, Input, and Output Directories
setenv WORKDIR ${CMAQ_HOME}/CCTM/scripts       #> Working Directory. Where the runscript is.
setenv OUTDIR  ${CMAQ_DATA}/output_CCTM_${RUNID} #> Output Directory
setenv INPDIR  ${CMAQ_DATA}/SE52BENCH/single_day/cctm_input  #> Input Directory
setenv LOGDIR  ${OUTDIR}/LOGS     #> Log Directory Location
setenv NMLpath ${BLD}             #> Location of Namelists. Common places are:
                                   #>   ${WORKDIR} | ${CCTM_SRC}/MECHS/${MECH} | ${BLD}

# =====================================================================
#> CCTM Configuration Options
# =====================================================================

#> Set Start and End Days for looping
setenv NEW_START TRUE            #> Set to FALSE for model restart
set START_DATE = "2011-07-01"     #> beginning date (July 1, 2011)
set END_DATE   = "2011-07-01"     #> ending date    (July 14, 2011)

#> Set Timestepping Parameters
set STTIME     = 000000            #> beginning GMT time (HHMMSS)
set NSTEPS     = 240000            #> time duration (HHMMSS) for this run
set TSTEP      = 010000            #> output time step interval (HHMMSS)

#> Horizontal domain decomposition
if ( $PROC == serial ) then
   setenv NPCOL_NPROW "1 1"; set NPROCS   = 1 # single processor setting
else
   @ NPCOL  =  2; @ NPROW =  4
   @ NPROCS = $NPCOL * $NPROW
   setenv NPCOL_NPROW "$NPCOL $NPROW";
endif

#> Vertical extent
set NZ         = 35

#setenv LOGFILE $CMAQ_HOME/$RUNID.log  #> log file name; uncomment to write standard output to a log, otherwise write to screen

setenv GRID_NAME SE52BENCH         #> check GRIDDESC file for GRID_NAME options
setenv GRIDDESC $INPDIR/GRIDDESC   #> grid description file

#> Output Species and Layer Options
#>   CONC file species; comment or set to "ALL" to write all species to CONC
#setenv CONC_SPCS "O3 NO ANO3I ANO3J NO2 FORM ISOP ANH4J ASO4I ASO4J"
#setenv CONC_BLEV_ELEV " 1 4" #> CONC file layer range; comment to write all layers to CONC

#>   ACONC file species; comment or set to "ALL" to write all species to ACONC
#setenv AVG_CONC_SPCS "O3 NO CO NO2 ASO4I ASO4J NH3"
setenv AVG_CONC_SPCS "ALL"
setenv ACONC_BLEV_ELEV " 1 1" #> ACONC file layer range; comment to write all layers to ACONC
setenv AVG_FILE_ENDTIME N     #> override default beginning ACON timestamp [ default: N ]

setenv EXECUTION_ID $EXEC    #> define the model execution id

#> Sychronization Time Step and Tolerance Options
setenv CTM_MAXSYNC 300       #> max sync time step (sec) [ default: 720 ]
setenv CTM_MINSYNC  60       #> min sync time step (sec) [ default: 60 ]
setenv SIGMA_SYNC_TOP 0.7    #> top sigma level thru which sync step determined [ default: 0.7 ]
#setenv ADV_HDIV_LIM 0.95     #> maximum horiz. div. limit for adv step adjust [ default: 0.9 ]
setenv CTM_ADV_CFL 0.95      #> max CFL [ default: 0.75]
#setenv RB_ATOL 1.0E-09       #> global ROS3 solver abs tol [ default: 1.0E-07 ]

#> Science Options
setenv CTM_WB_DUST Y         #> use inline windblown dust emissions [ default: Y ]
setenv CTM_ERODE_AGLAND Y    #> use agricultural activity for windblown dust
                             #>    [ default: N ]; ignore if CTM_WB_DUST = N
setenv CTM_WBDUST_BELD BELD3 #> landuse database for identifying dust source regions
                             #>    [ default: BELD3 ]; ignore if CTM_WB_DUST = N
setenv CTM_LTNG_NO Y         #> turn on lightning NOx [ default: N ]
setenv CTM_WVEL Y            #> save derived vertical velocity component to conc
                             #>    file [ default: N ]
setenv KZMIN Y               #> use Min Kz option in edyintb [ default: Y ],
                             #>    otherwise revert to Kz0UT
setenv CTM_ILDEPV Y          #> calculate in-line deposition velocities [ default: Y ]
setenv CTM_MOSAIC N          #> landuse specific deposition velocities [ default: N ]
setenv CTM_FST N             #> mosaic method to get land-use specific stomatal flux
                             #>    [ default: N ]
setenv CTM_ABFLUX Y          #> ammonia bi-directional flux for in-line deposition
                             #>    velocities [ default: N ]; ignore if CTM_ILDEPV = N
setenv CTM_HGBIDI N          #> mercury bi-directional flux for in-line deposition
                             #>    velocities [ default: N ]; ignore if CTM_ILDEPV = N
setenv CTM_SFC_HONO Y        #> surface HONO interaction [ default: Y ]; ignore if CTM_ILDEPV = N
setenv CTM_GRAV_SETL Y       #> vdiff aerosol gravitational sedimentation [ default: Y ]
setenv CTM_BIOGEMIS Y        #> calculate in-line biogenic emissions [ default: N ]
setenv CTM_PT3DEMIS Y        #> calculate in-line plume rise for elevated point emissions
                             #>    [ default: N ]
setenv CTM_ZERO_PCSOA N      #> turn off the emissions of the VOC precursor to pcSOA.
                             #>    The CMAQ dev team recommends leaving pcSOA mass in the
                             #>    model for production runs. [ default: N ]

#> Process Analysis Options
setenv CTM_PROCAN N          #> use process analysis [ default: N]
#> process analysis global column, row and layer ranges
#> user must check GRIDDESC for validity!
setenv PA_BCOL_ECOL "10 320"
setenv PA_BROW_EROW "10 195"
setenv PA_BLEV_ELEV "1  4"

#> I/O Controls
setenv IOAPI_LOG_WRITE F     #> turn on excess WRITE3 logging [ options: T | F ]
setenv FL_ERR_STOP N         #> stop on inconsistent input files
setenv PROMPTFLAG F          #> turn on I/O-API PROMPT*FILE interactive mode [ options: T | F ]
setenv IOAPI_OFFSET_64 Y    #> support large timestep records (>2GB/timestep record) [ options: YES | NO ]
setenv CTM_EMISCHK N         #> Abort CMAQ if missing surrogates from emissions Input files

#> Aerosol Diagnostic Controls
setenv CTM_AVISDIAG Y        #> Aerovis diagnostic file [ default: N ]
setenv CTM_PMDIAG Y          #> Instantaneous Aerosol Diagnostic File [ default: Y ]
setenv CTM_APMDIAG Y         #> Hourly-Average Aerosol Diagnostic File [ default: Y ]
setenv APMDIAG_BLEV_ELEV "1 3" #> layer range for average pmdiag
setenv APMDIAG_BLEV_ELEV ""  #> layer range for average pmdiag = NLAYS

#> Diagnostic Output Flags
setenv CTM_CKSUM Y           #> cksum report [ default: Y ]
setenv CLD_DIAG Y            #> cloud diagnostic file [ default: N ]
setenv CTM_AERDIAG Y         #> aerosol diagnostic file [ default: N ]
setenv CTM_PHOTDIAG Y        #> photolysis diagnostic file [ default: N ]
setenv CTM_SSEMDIAG Y        #> sea-salt emissions diagnostic file [ default: N ]
setenv CTM_DUSTEM_DIAG Y     #> windblown dust emissions diagnostic file [ default: N ]; ignore if CTM_WB_DUST = N
setenv CTM_DEPV_FILE Y       #> deposition velocities diagnostic file [ default: N ]
setenv VDIFF_DIAG_FILE Y     #> vdiff & possibly aero grav. sedimentation diagnostic file [ default: N ]
setenv LTNGDIAG Y            #> lightning diagnostic file [ default: N ]
setenv CTM_AOD Y             #> AOD diagnostic file [ default: N ]
setenv B3GTS_DIAG Y          #> beis mass emissions diagnostic file [ default: N ]
setenv PT3DDIAG N            #> optional 3d point source emissions diagnostic file [ default: N]; ignore if CTM_PT3DEMIS = N
setenv PT3DFRAC N            #> optional layer fractions diagnostic (play) file(s) [ default: N]; ignore if CTM_PT3DEMIS = N
setenv REP_LAYER_MIN -1      #> Minimum layer for reporting plume rise info [ default: -1 ]

set DISP = delete            #> [ delete | keep ] existing output files


# =====================================================================
#> Input Directories and Filenames
# =====================================================================

set ICpath    = $INPDIR/icbc              #> initial conditions input directory
set BCpath    = $INPDIR/icbc              #> boundary conditions input directory
set EMISpath  = $INPDIR/emis/gridded_area #> surface emissions input directory
set IN_PTpath = $INPDIR/emis/inln_point   #> elevated emissions input directory (in-line point only)
set IN_LTpath = $INPDIR/lightning         #> lightning NOx input directory
set METpath   = $INPDIR/met/mcip          #> meteorology input directory
#set JVALpath  = $INPDIR/jproc            #> offline photolysis rate table directory
set OMIpath   = $BLD                      #> ozone columne data for the photolysis model
set LUpath    = $INPDIR/land              #> BELD landuse data for windblown dust model
set SZpath    = $INPDIR/land              #> surf zone file for in-line seasalt emissions

set ICBC_CASE = 2013ef_v6_13g_s07         #> Version label for the ICBCs
set EMIS_CASE = 2013ef_v6_13g_s07_hg      #> Version Label for the Emissions

# =====================================================================
#> Begin Loop Through Simulation Days
# =====================================================================

set TODAYG = ${START_DATE}
set TODAYJ = `date -ud "${START_DATE}" +%Y%j` #> Convert YYYY-MM-DD to YYYYJJJ
set STOP_DAY = `date -ud "${END_DATE}" +%Y%j` #> Convert YYYY-MM-DD to YYYYJJJ

while ($TODAYJ <= $STOP_DAY )  #>Compare dates in terms of YYYYJJJ

  #> Retrieve Calendar day Information
  set YYYYMMDD = `date -ud "${TODAYG}" +%Y%m%d` #> Convert YYYY-MM-DD to YYYYMMDD
  set YYMMDD = `date -ud "${TODAYG}" +%y%m%d`   #> Convert YYYY-MM-DD to YYMMDD
  set YYYYJJJ = $TODAYJ

  #> Calculate Yesterday's Date
  set YESTERDAY = `date -ud "${TODAYG}-1days" +%Y%m%d` #> Convert YYYY-MM-DD to YYYYJJJ

# =====================================================================
#> Input Files (Some are Day-Dependent)
# =====================================================================

  #> Initial conditions
  if ($NEW_START == true || $NEW_START == TRUE ) then
     setenv ICFILE ICON_20110630_bench.nc
     setenv INITIAL_RUN Y #related to restart soil information file
     rm -rf $LOGDIR/CTM_LOG*${RUNID}*  # Remove all Log Files Since this is a new start
     mkdir -p $OUTDIR
  else
     set ICpath = $OUTDIR
     setenv ICFILE CCTM_CGRID_${RUNID}_${YESTERDAY}.nc
     setenv INITIAL_RUN N
  endif

  #> Boundary conditions
  set BCFILE = BCON_${YYYYMMDD}_bench.nc

  #> Off-line photolysis rates
  #set JVALfile  = JTABLE_${YYYYJJJ}

  #> Ozone column data
  set OMIfile   = OMI_1979_to_2015.dat

  #> Optics file
  set OPTfile = PHOT_OPTICS.dat

  #> MCIP meteorology files
  setenv GRID_BDY_2D $METpath/GRIDBDY2D_${YYMMDD}.nc
  setenv GRID_CRO_2D $METpath/GRIDCRO2D_${YYMMDD}.nc
  setenv GRID_CRO_3D $METpath/GRIDCRO3D_${YYMMDD}.nc
  setenv GRID_DOT_2D $METpath/GRIDDOT2D_${YYMMDD}.nc
  setenv MET_CRO_2D $METpath/METCRO2D_${YYMMDD}.nc
  setenv MET_CRO_3D $METpath/METCRO3D_${YYMMDD}.nc
  setenv MET_DOT_3D $METpath/METDOT3D_${YYMMDD}.nc
  setenv MET_BDY_3D $METpath/METBDY3D_${YYMMDD}.nc

  setenv LAYER_FILE $MET_CRO_3D  # Deprecated: MET_CRO_3D is now read directly in CCTM


  #> Emissions files
  if ( $CTM_PT3DEMIS == 'N' ) then
     #> Offline 3d emissions file name
     set EMISfile  = emis_mole_all_${YYYYMMDD}_cb6_bench.nc
  else
     #> In-line emissions configuration
     set STKCASEG = 12US1_2011ek_cb6cmaq_v6_11g           # Stack Group Version Label
     set STKCASEE = 12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g   # Stack Emission Version Label
     set EMISfile  = emis_mole_all_${YYYYMMDD}_cb6_bench.nc #> Surface emissions
     setenv NPTGRPS 5          #> Number of elevated source groups

     setenv STK_GRPS_01 $IN_PTpath/stack_groups/stack_groups_ptnonipm_${STKCASEG}.nc
     setenv STK_GRPS_02 $IN_PTpath/stack_groups/stack_groups_ptegu_${STKCASEG}.nc
     setenv STK_GRPS_03 $IN_PTpath/stack_groups/stack_groups_othpt_${STKCASEG}.nc
     setenv STK_GRPS_04 $IN_PTpath/stack_groups/stack_groups_ptfire_${YYYYMMDD}_${STKCASEG}.nc
     setenv STK_GRPS_05 $IN_PTpath/stack_groups/stack_groups_pt_oilgas_${STKCASEG}.nc
     setenv LAYP_STTIME $STTIME
     setenv LAYP_NSTEPS $NSTEPS

     setenv STK_EMIS_01 $IN_PTpath/ptnonipm/inln_mole_ptnonipm_${YYYYMMDD}_${STKCASEE}.nc
     setenv STK_EMIS_02 $IN_PTpath/ptegu/inln_mole_ptegu_${YYYYMMDD}_${STKCASEE}.nc
     setenv STK_EMIS_03 $IN_PTpath/othpt/inln_mole_othpt_${YYYYMMDD}_${STKCASEE}.nc
     setenv STK_EMIS_04 $IN_PTpath/ptfire/inln_mole_ptfire_${YYYYMMDD}_${STKCASEE}.nc
     setenv STK_EMIS_05 $IN_PTpath/pt_oilgas/inln_mole_pt_oilgas_${YYYYMMDD}_${STKCASEE}.nc
     setenv LAYP_STDATE $YYYYJJJ
  endif

  #> Lightning NOx configuration
  if ( $CTM_LTNG_NO == 'Y' ) then
     setenv LTNGNO "InLine"    #> set LTNGNO to "Inline" to activate in-line calculation

  #> In-line lightning NOx options
     setenv USE_NLDN  Y        #> use hourly NLDN strike file [ default: Y ]
     if ( $USE_NLDN == Y ) then
        setenv NLDN_STRIKES $INPDIR/lightning/NLDN.12US1.${YYYYMMDD}_bench.nc
     else
        setenv LOG_START 2.0   #> RC value to transit linear to log linear
     endif
     setenv LTNGPARMS_FILE $INPDIR/lightning/LTNG_AllParms_12US1_bench.nc #> lightning parameter file
  endif


  #> In-line biogenic emissions configuration
  if ( $CTM_BIOGEMIS == 'Y' ) then   
     set IN_BEISpath = ${INPDIR}/land
     set GSPROpath   = ${IN_BEISpath}
     setenv GSPRO      $GSPROpath/gspro_biogenics_1mar2017.txt
     setenv B3GRD      $IN_BEISpath/b3grd_bench.nc
     setenv BIOG_SPRO  B10C6 #> speciation profile to use for biogenics
     setenv BIOSW_YN   Y     #> use frost date switch [ default: Y ]
     setenv BIOSEASON  $IN_BEISpath/bioseason.cmaq.2011_12US1_wetland100.ghrsst_bench.ncf #> ignore season switch file if BIOSW_YN = N
     setenv SUMMER_YN  Y     #> Use summer normalized emissions? [ default: Y ]
     setenv PX_VERSION Y     #> MCIP is PX version? [ default: N ]
     setenv SOILINP    $OUTDIR/CCTM_SOILOUT_${RUNID}_${YESTERDAY}.nc
                             #> Biogenic NO soil input file; ignore if INITIAL_RUN = Y
  endif

  #> Windblown dust emissions configuration
  if ( $CTM_WB_DUST == 'Y' ) then
     # Input variables for BELD3 Landuse option
     setenv DUST_LU_1 $LUpath/beld3_12US1_459X299_output_a_bench.nc
     setenv DUST_LU_2 $LUpath/beld4_12US1_459X299_output_tot_bench.nc
     setenv MODIS_FPAR $LUpath/modis_bench.nc

     if ( $CTM_ERODE_AGLAND == 'Y' ) then
        setenv CROPMAP01 ${INPDIR}/land/BeginPlanting_12km_bench.nc
        setenv CROPMAP04 ${INPDIR}/land/EndPlanting_12km_bench.nc
        setenv CROPMAP08 ${INPDIR}/land/EndHarvesting_12km_bench.nc
     endif
  endif

  #> In-line sea salt emisisions configuration
  setenv OCEAN_1 $SZpath/12US1_surf_bench.nc #> horizontal grid-dependent surf zone file

  #> Bidiretional ammonia configuration
  if ( $CTM_ABFLUX == 'Y' ) then
     setenv E2C_Soilfile  ${INPDIR}/land/2011_US1_soil_bench.nc      
     setenv E2C_Fertfile  ${INPDIR}/land/2011_US1_time${YYYYMMDD}_bench.nc   
     setenv B4LU_file     ${INPDIR}/land/beld4_12kmCONUS_2006nlcd_bench.nc   
     setenv E2C_SOIL ${E2C_Soilfile}
     setenv E2C_FERT ${E2C_Fertfile}
     setenv BELD4_LU ${B4LU_file}
  endif

# =====================================================================
#> Output Files
# =====================================================================
  #> set output file name extensions
  setenv CTM_APPL ${RUNID}_${YYYYMMDD}
  #> set output file names
  setenv S_CGRID         "$OUTDIR/CCTM_CGRID_${CTM_APPL}.nc"         #> 3D Inst. Concenctrations
  setenv CTM_CONC_1      "$OUTDIR/CCTM_CONC_${CTM_APPL}.nc -v"       #> On-Hour Concentrations
  setenv A_CONC_1        "$OUTDIR/CCTM_ACONC_${CTM_APPL}.nc -v"      #> Hourly Avg. Concentrations
  setenv MEDIA_CONC      "$OUTDIR/CCTM_MEDIA_CONC_${CTM_APPL}.nc -v" #> NH3 Conc. in Media
  setenv CTM_DRY_DEP_1   "$OUTDIR/CCTM_DRYDEP_${CTM_APPL}.nc -v"     #> Hourly Dry Deposition
  setenv CTM_DEPV_DIAG   "$OUTDIR/CCTM_DEPV_${CTM_APPL}.nc -v"       #> Dry Deposition Velocities
  setenv CTM_PT3D_DIAG   "$OUTDIR/CCTM_PT3D_${CTM_APPL}.nc -v"       #>
  setenv B3GTS_S         "$OUTDIR/CCTM_B3GTS_S_${CTM_APPL}.nc -v"    #> Biogenic Emissions
  setenv SOILOUT         "$OUTDIR/CCTM_SOILOUT_${CTM_APPL}.nc"       #> Soil Emissions
  setenv CTM_WET_DEP_1   "$OUTDIR/CCTM_WETDEP1_${CTM_APPL}.nc -v"    #> Wet Dep From All Clouds
  setenv CTM_WET_DEP_2   "$OUTDIR/CCTM_WETDEP2_${CTM_APPL}.nc -v"    #> Wet Dep From SubGrid Clouds
  setenv CTM_VIS_1       "$OUTDIR/CCTM_PMVIS_${CTM_APPL}.nc -v"      #> On-Hour Visibility
  setenv CTM_AVIS_1      "$OUTDIR/CCTM_APMVIS_${CTM_APPL}.nc -v"     #> Hourly-Averaged Visibility
  setenv CTM_PMDIAG_1    "$OUTDIR/CCTM_PMDIAG_${CTM_APPL}.nc -v"     #> On-Hour Particle Diagnostics
  setenv CTM_APMDIAG_1   "$OUTDIR/CCTM_APMDIAG_${CTM_APPL}.nc -v"    #> Hourly Avg. Particle Diagnostic
  setenv CTM_RJ_1        "$OUTDIR/CCTM_PHOTDIAG1_${CTM_APPL}.nc -v"  #> Photolysis Rxn Diagnostics
  setenv CTM_RJ_2        "$OUTDIR/CCTM_PHOTDIAG2_${CTM_APPL}.nc -v"  #> Photolysis Rates Output
  setenv CTM_SSEMIS_1    "$OUTDIR/CCTM_SSEMIS_${CTM_APPL}.nc -v"     #> Sea Spray Emissions
  setenv CTM_DUST_EMIS_1 "$OUTDIR/CCTM_DUSTEMIS_${CTM_APPL}.nc -v"   #> Dust Emissions
  setenv CTM_IPR_1       "$OUTDIR/CCTM_PA_1_${CTM_APPL}.nc -v"       #> Process Analysis
  setenv CTM_IPR_2       "$OUTDIR/CCTM_PA_2_${CTM_APPL}.nc -v"       #> Process Analysis
  setenv CTM_IPR_3       "$OUTDIR/CCTM_PA_3_${CTM_APPL}.nc -v"       #> Process Analysis
  setenv CTM_IRR_1       "$OUTDIR/CCTM_IRR_1_${CTM_APPL}.nc -v"      #> Chem Process Analysis
  setenv CTM_IRR_2       "$OUTDIR/CCTM_IRR_2_${CTM_APPL}.nc -v"      #> Chem Process Analysis
  setenv CTM_IRR_3       "$OUTDIR/CCTM_IRR_3_${CTM_APPL}.nc -v"      #> Chem Process Analysis
  setenv CTM_DRY_DEP_MOS "$OUTDIR/CCTM_DDMOS_${CTM_APPL}.nc -v"      #> Dry Dep
  setenv CTM_DRY_DEP_FST "$OUTDIR/CCTM_DDFST_${CTM_APPL}.nc -v"      #> Dry Dep
  setenv CTM_DEPV_MOS    "$OUTDIR/CCTM_DEPVFST_${CTM_APPL}.nc -v"    #> Dry Dep Velocity
  setenv CTM_DEPV_FST    "$OUTDIR/CCTM_DEPVMOS_${CTM_APPL}.nc -v"    #> Dry Dep Velocity
  setenv CTM_VDIFF_DIAG  "$OUTDIR/CCTM_VDIFF_DIAG_${CTM_APPL}.nc -v" #> Vertical Dispersion Diagnostic
  setenv CTM_VSED_DIAG   "$OUTDIR/CCTM_VSED_DIAG_${CTM_APPL}.nc -v"  #> Particle Grav. Settling Velocity
  setenv CTM_AOD_1       "$OUTDIR/CCTM_AOD_DIAG_${CTM_APPL}.nc -v"   #> Aerosol Optical Depth Diagnostic
  setenv CTM_LTNGDIAG_1  "$OUTDIR/CCTM_LTNGHRLY_${CTM_APPL}.nc -v"   #> Hourly Avg Lightning NO
  setenv CTM_LTNGDIAG_2  "$OUTDIR/CCTM_LTNGCOL_${CTM_APPL}.nc -v"    #> Column Total Lightning NO

  #> set floor file (neg concs)
  setenv FLOOR_FILE ${OUTDIR}/FLOOR_${CTM_APPL}.txt

  #> create output directory
  if ( ! -d "$OUTDIR" ) mkdir -p $OUTDIR

  #> look for existing log files and output files
  set log_test = `ls CTM_LOG_???.${CTM_APPL}`
  set OUT_FILES = (${FLOOR_FILE} ${S_CGRID} ${CTM_CONC_1} ${A_CONC_1} ${MEDIA_CONC}         \
             ${CTM_DRY_DEP_1} $CTM_DEPV_DIAG $CTM_PT3D_DIAG $B3GTS_S $SOILOUT $CTM_WET_DEP_1\
             $CTM_WET_DEP_2 $CTM_VIS_1 $CTM_AVIS_1 $CTM_PMDIAG_1 $CTM_APMDIAG_1             \
             $CTM_RJ_1 $CTM_RJ_2 $CTM_SSEMIS_1 $CTM_DUST_EMIS_1 $CTM_IPR_1 $CTM_IPR_2       \
             $CTM_IPR_3 $CTM_IRR_1 $CTM_IRR_2 $CTM_IRR_3 $CTM_DRY_DEP_MOS                   \
             $CTM_DRY_DEP_FST $CTM_DEPV_MOS $CTM_DEPV_FST $CTM_VDIFF_DIAG $CTM_VSED_DIAG    \
             $CTM_AOD_1 $CTM_LTNGDIAG_1 $CTM_LTNGDIAG_2)
  set OUT_FILES = `echo $OUT_FILES | sed "s; -v;;g" `
  echo $OUT_FILES
  set out_test = `ls $OUT_FILES`

  #> delete previous output if requested
  if ( $DISP == 'delete' ) then
     #> remove previous log files
     echo " ancillary log files being deleted"
     foreach file ( $log_test )
        echo " deleting $file"
        /bin/rm -f $file  
     end

     #> remove previous output files
     echo " output files being deleted"
     foreach file ( $out_test )
        echo " deleting $file"
        /bin/rm -f $file  
     end

  else
     #> error if previous log files exist
     if ( "$log_test" != "" ) then
       echo "*** Logs exist - run ABORTED ***"
       echo "*** To overide, set $DISP == delete in run_cctm.csh ***"
       echo "*** and these files will be automatically deleted. ***"
       exit 1
     endif

     #> error if previous output files exist
     if ( "$out_test" != "" ) then
       echo "*** Output Files Exist - run will be ABORTED ***"
       foreach file ( $out_test )
          echo " cannot delete $file"
       end
       echo "*** To overide, set $DISP == delete in run_cctm.csh ***"
       echo "*** and these files will be automatically deleted. ***"
       exit 1
     endif
  endif

  #> for the run control ...
  setenv CTM_STDATE      $YYYYJJJ
  setenv CTM_STTIME      $STTIME
  setenv CTM_RUNLEN      $NSTEPS
  setenv CTM_TSTEP       $TSTEP
  setenv EMIS_1 $EMISpath/$EMISfile
  setenv INIT_GASC_1 $ICpath/$ICFILE
  setenv INIT_AERO_1 $INIT_GASC_1
  setenv INIT_NONR_1 $INIT_GASC_1
  setenv INIT_TRAC_1 $INIT_GASC_1
  setenv BNDY_GASC_1 $BCpath/$BCFILE
  setenv BNDY_AERO_1 $BNDY_GASC_1
  setenv BNDY_NONR_1 $BNDY_GASC_1
  setenv BNDY_TRAC_1 $BNDY_GASC_1
  setenv OMI $OMIpath/$OMIfile
  setenv OPTICS_DATA $OMIpath/$OPTfile
  #setenv XJ_DATA $JVALpath/$JVALfile
  set TR_DVpath = $METpath
  set TR_DVfile = $MET_CRO_2D

  #> species defn & photolysis
  setenv gc_matrix_nml ${NMLpath}/GC_$MECH.nml
  setenv ae_matrix_nml ${NMLpath}/AE_$MECH.nml
  setenv nr_matrix_nml ${NMLpath}/NR_$MECH.nml
  setenv tr_matrix_nml ${NMLpath}/Species_Table_TR_0.nml

  #> check for photolysis input data
  setenv CSQY_DATA ${NMLpath}/CSQY_DATA_$MECH

  if (! (-e $CSQY_DATA ) ) then
     echo " $CSQY_DATA  not found "
     exit 1
  endif
  if (! (-e $OPTICS_DATA ) ) then
     echo " $OPTICS_DATA  not found "
     exit 1
  endif

# ===================================================================
#> Execution Portion
# ===================================================================

  #> Print attributes of the executable
  ls -l $BLD/$EXEC; size $BLD/$EXEC
# unlimit
# limit

  date

  #> Executable call for single PE, uncomment to invoke
  # /usr/bin/time  $BLD/$EXEC

  #> Executable call for multi PE, configure for your system
  # set MPI = /usr/local/intel/impi/3.2.2.006/bin64
  # set MPIRUN = $MPI/mpirun
  time mpirun -np $NPROCS $BLD/$EXEC

  date

# ===================================================================
#> Finalize Run for This Day and Loop to Next Day
# ===================================================================

  #> Save Log Files and Move on to Next Simulation Day
  if (! -e $LOGDIR ) then
    mkdir $LOGDIR
  endif
  mv CTM_LOG_???.${CTM_APPL} $LOGDIR

  #> The next simulation day will, by definition, be a restart
  setenv NEW_START false

  #> Increment both Gregorian and Julian Days
  set TODAYG = `date -ud "${TODAYG}+1days" +%Y-%m-%d` #> Add a day for tomorrow
  set TODAYJ = `date -ud "${TODAYG}" +%Y%j` #> Convert YYYY-MM-DD to YYYYJJJ

end  #Loop to the next Simulation Day

exit

pcc

Compiler is set to gcc
model       CCTM_v521.exe;
repo        /home/CMAQ-5.2.1/CCTM/src;
mechanism   cb05e51_ae6_aq;
lib_base    /home/CMAQ-5.2.1/lib;
lib_1       ioapi/modules;
lib_2       ioapi/include_files;
lib_3       "mpi -I.";
lib_4       ioapi/lib;
cpp_flags   " -Dparallel  -DSUBST_BARRIER=SE_BARRIER -DSUBST_GLOBAL_MAX=SE_GLOBAL_MAX -DSUBST_GLOBAL_MIN=SE_GLOBAL_MIN -DSUBST_GLOBAL_MIN_DATA=SE_GLOBAL_MIN_DATA -DSUBST_GLOBAL_TO_LOCAL_COORD=SE_GLOBAL_TO_LOCAL_COORD -DSUBST_GLOBAL_SUM=SE_GLOBAL_SUM -DSUBST_GLOBAL_LOGICAL=SE_GLOBAL_LOGICAL -DSUBST_LOOP_INDEX=SE_LOOP_INDEX -DSUBST_SUBGRID_INDEX=SE_SUBGRID_INDEX -DSUBST_HI_LO_BND_PE=SE_HI_LO_BND_PE -DSUBST_SUM_CHK=SE_SUM_CHK -DSUBST_INIT_ARRAY=SE_INIT_ARRAY -DSUBST_COMM=SE_COMM -DSUBST_MY_REGION=SE_MY_REGION -DSUBST_SLICE=SE_SLICE -DSUBST_GATHER=SE_GATHER -DSUBST_DATA_COPY=SE_DATA_COPY -DSUBST_IN_SYN=SE_IN_SYN";
f_compiler  mpif90;
fstd        "-O3 -funroll-loops -finit-character=32 -Wtabs -Wsurprising";
dbg         "-Wall -O0 -g -fcheck=all -ffpe-trap=invalid,zero,overflow -fbacktrace";
f_flags     "-ffixed-form -ffixed-line-length-132 -funroll-loops -finit-character=32";
f90_flags   "-ffree-form -ffree-line-length-none -funroll-loops -finit-character=32";
c_compiler  gcc;
c_flags     "-O2 -DFLDMN -I";
link_flags  "";
ioapi       "-lioapi";     
netcdf      "-lnetcdff -lnetcdf -lgomp";
mpich       " ";
include SUBST_PE_COMM    ./PE_COMM.EXT;
include SUBST_CONST      ./CONST.EXT;
include SUBST_FILES_ID   ./FILES_CTM.EXT;
include SUBST_EMISPRM    ./EMISPRM.EXT;
// Parallel / Include message passing definitions
include SUBST_MPI        ./mpif.h;
// options are stenex or se_noop
Module STENEX/se;
// parallel executable; stenex and pario included
Module PARIO;
// options are par, par_nodistr and par_noop
Module par/mpi;
// options are wrf and yamo
Module driver/wrf;
// options are cartesian
Module grid/cartesian;
// options are yamo
Module init/yamo;
// options are gencoor_wrf and gencoor
Module couple/gencoor_wrf;
// options are yamo
Module hadv/yamo;
// options are wrf and yamo
Module vadv/wrf;
// options are multiscale
Module hdiff/multiscale;
// options are acm2
Module vdiff/acm2;
// options are m3dry
Module depv/m3dry;
// options are emis
Module emis/emis;
// options are beis3
Module biog/beis3;
// options are smoke
Module plrise/smoke;
// options are cgrid_spcs_nml and cgrid_spcs_icl
Module spcs/cgrid_spcs_nml;
// options are inline and table
Module phot/inline;
//  gas chemistry solvers
// options are smvgear, ros3, and ebi_<mech>; see 'gas chemistry mechanisms' for <mech>
Module gas/ebi_cb05e51_ae6_aq;
//  gas chemistry mechanisms
// options are cb05e51_ae6_aq, cb05e51_ae6nvPOA_aq, cb05eh51_ae6_aq, cb05mp51_ae6_aq, cb05tucl_ae6_aq, cb05tump_ae6_aq, cb6r3_ae6_aq, cb6r3_ae6nvPOA_aq, racm2_ae6_aq, saprc07tb_ae6_aq, saprc07tc_ae6_aq, saprc07tc_ae6nvPOA_aq, saprc07tic_ae6i_aq, saprc07tic_ae6i_aqkmti, saprc07tic_ae6invPOA_aq
Module MECHS/cb05e51_ae6_aq;
//  tracer modules
// options are trac0, trac1
Module MECHS/trac0;
// options are aero6
Module aero/aero6;
// options are acm_ae6, acm_ae6_kmt, and acm_ae6_mp
Module cloud/acm_ae6;
// compile for inline process analysis
Module procan/pa;
// options are util
Module util/util;
   
setenv WORKDIR /home/CMAQ-5.2.1/CCTM/scripts
setenv OUTDIR /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH
setenv INPDIR /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input
setenv LOGDIR /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS
setenv NMLpath /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc
setenv NEW_START TRUE
set START_DATE = 2011-07-01
set END_DATE = 2011-07-01
set STTIME = 000000
set NSTEPS = 240000
set TSTEP = 010000
if ( mpi == serial ) then
@ NPCOL = 2
@ NPROW = 4
@ NPROCS = 2 * 4
setenv NPCOL_NPROW 2 4
endif
set NZ = 35
setenv GRID_NAME SE52BENCH
setenv GRIDDESC /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/GRIDDESC
setenv AVG_CONC_SPCS ALL
setenv ACONC_BLEV_ELEV  1 1
setenv AVG_FILE_ENDTIME N
setenv EXECUTION_ID CCTM_v521.exe
setenv CTM_MAXSYNC 300
setenv CTM_MINSYNC 60
setenv SIGMA_SYNC_TOP 0.7
setenv CTM_ADV_CFL 0.95
setenv CTM_WB_DUST Y
setenv CTM_ERODE_AGLAND Y
setenv CTM_WBDUST_BELD BELD3
setenv CTM_LTNG_NO Y
setenv CTM_WVEL Y
setenv KZMIN Y
setenv CTM_ILDEPV Y
setenv CTM_MOSAIC N
setenv CTM_FST N
setenv CTM_ABFLUX Y
setenv CTM_HGBIDI N
setenv CTM_SFC_HONO Y
setenv CTM_GRAV_SETL Y
setenv CTM_BIOGEMIS Y
setenv CTM_PT3DEMIS Y
setenv CTM_ZERO_PCSOA N
setenv CTM_PROCAN N
setenv PA_BCOL_ECOL 10 320
setenv PA_BROW_EROW 10 195
setenv PA_BLEV_ELEV 1  4
setenv IOAPI_LOG_WRITE F
setenv FL_ERR_STOP N
setenv PROMPTFLAG F
setenv IOAPI_OFFSET_64 Y
setenv CTM_EMISCHK N
setenv CTM_AVISDIAG Y
setenv CTM_PMDIAG Y
setenv CTM_APMDIAG Y
setenv APMDIAG_BLEV_ELEV 1 3
setenv APMDIAG_BLEV_ELEV
setenv CTM_CKSUM Y
setenv CLD_DIAG Y
setenv CTM_AERDIAG Y
setenv CTM_PHOTDIAG Y
setenv CTM_SSEMDIAG Y
setenv CTM_DUSTEM_DIAG Y
setenv CTM_DEPV_FILE Y
setenv VDIFF_DIAG_FILE Y
setenv LTNGDIAG Y
setenv CTM_AOD Y
setenv B3GTS_DIAG Y
setenv PT3DDIAG N
setenv PT3DFRAC N
setenv REP_LAYER_MIN -1
set DISP = delete
set ICpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc
set BCpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc
set EMISpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/gridded_area
set IN_PTpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point
set IN_LTpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/lightning
set METpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip
set OMIpath = /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc
set LUpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land
set SZpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land
set ICBC_CASE = 2013ef_v6_13g_s07
set EMIS_CASE = 2013ef_v6_13g_s07_hg
set TODAYG = 2011-07-01
set TODAYJ = `date -ud "${START_DATE}" +%Y%j`
date -ud 2011-07-01 +%Y%j
set STOP_DAY = `date -ud "${END_DATE}" +%Y%j`
date -ud 2011-07-01 +%Y%j
while ( 2011182 < = 2011182 )
set YYYYMMDD = `date -ud "${TODAYG}" +%Y%m%d`
date -ud 2011-07-01 +%Y%m%d
set YYMMDD = `date -ud "${TODAYG}" +%y%m%d`
date -ud 2011-07-01 +%y%m%d
set YYYYJJJ = 2011182
set YESTERDAY = `date -ud "${TODAYG}-1days" +%Y%m%d`
date -ud 2011-07-01-1days +%Y%m%d
if ( TRUE == true || TRUE == TRUE ) then
setenv ICFILE ICON_20110630_bench.nc
setenv INITIAL_RUN Y
rm -rf /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS/CTM_LOG_001.v521_gcc_SE52BENCH_20110701 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS/CTM_LOG_002.v521_gcc_SE52BENCH_20110701 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS/CTM_LOG_003.v521_gcc_SE52BENCH_20110701 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS/CTM_LOG_004.v521_gcc_SE52BENCH_20110701 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS/CTM_LOG_005.v521_gcc_SE52BENCH_20110701 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS/CTM_LOG_006.v521_gcc_SE52BENCH_20110701 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS/CTM_LOG_007.v521_gcc_SE52BENCH_20110701
mkdir -p /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH
else
set BCFILE = BCON_20110701_bench.nc
set OMIfile = OMI_1979_to_2015.dat
set OPTfile = PHOT_OPTICS.dat
setenv GRID_BDY_2D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDBDY2D_110701.nc
setenv GRID_CRO_2D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDCRO2D_110701.nc
setenv GRID_CRO_3D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDCRO3D_110701.nc
setenv GRID_DOT_2D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/GRIDDOT2D_110701.nc
setenv MET_CRO_2D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO2D_110701.nc
setenv MET_CRO_3D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO3D_110701.nc
setenv MET_DOT_3D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/METDOT3D_110701.nc
setenv MET_BDY_3D /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/METBDY3D_110701.nc
setenv LAYER_FILE /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO3D_110701.nc
if ( Y == N ) then
set STKCASEG = 12US1_2011ek_cb6cmaq_v6_11g
set STKCASEE = 12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g
set EMISfile = emis_mole_all_20110701_cb6_bench.nc
setenv NPTGRPS 5
setenv STK_GRPS_01 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_ptnonipm_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_02 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_ptegu_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_03 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_othpt_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_04 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_ptfire_20110701_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv STK_GRPS_05 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/stack_groups/stack_groups_pt_oilgas_12US1_2011ek_cb6cmaq_v6_11g.nc
setenv LAYP_STTIME 000000
setenv LAYP_NSTEPS 240000
setenv STK_EMIS_01 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/ptnonipm/inln_mole_ptnonipm_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_02 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/ptegu/inln_mole_ptegu_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_03 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/othpt/inln_mole_othpt_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_04 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/ptfire/inln_mole_ptfire_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv STK_EMIS_05 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/inln_point/pt_oilgas/inln_mole_pt_oilgas_20110701_12US1_cmaq_cb6e51_2011ek_cb6cmaq_v6_11g.nc
setenv LAYP_STDATE 2011182
endif
if ( Y == Y ) then
setenv LTNGNO InLine
setenv USE_NLDN Y
if ( Y == Y ) then
setenv NLDN_STRIKES /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/lightning/NLDN.12US1.20110701_bench.nc
else
setenv LTNGPARMS_FILE /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/lightning/LTNG_AllParms_12US1_bench.nc
endif
if ( Y == Y ) then
set IN_BEISpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land
set GSPROpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land
setenv GSPRO /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/gspro_biogenics_1mar2017.txt
setenv B3GRD /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/b3grd_bench.nc
setenv BIOG_SPRO B10C6
setenv BIOSW_YN Y
setenv BIOSEASON /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/bioseason.cmaq.2011_12US1_wetland100.ghrsst_bench.ncf
setenv SUMMER_YN Y
setenv PX_VERSION Y
setenv SOILINP /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110630.nc
endif
if ( Y == Y ) then
setenv DUST_LU_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/beld3_12US1_459X299_output_a_bench.nc
setenv DUST_LU_2 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/beld4_12US1_459X299_output_tot_bench.nc
setenv MODIS_FPAR /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/modis_bench.nc
if ( Y == Y ) then
setenv CROPMAP01 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/BeginPlanting_12km_bench.nc
setenv CROPMAP04 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/EndPlanting_12km_bench.nc
setenv CROPMAP08 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/EndHarvesting_12km_bench.nc
endif
endif
setenv OCEAN_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/12US1_surf_bench.nc
if ( Y == Y ) then
setenv E2C_Soilfile /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/2011_US1_soil_bench.nc
setenv E2C_Fertfile /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/2011_US1_time20110701_bench.nc
setenv B4LU_file /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/beld4_12kmCONUS_2006nlcd_bench.nc
setenv E2C_SOIL /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/2011_US1_soil_bench.nc
setenv E2C_FERT /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/2011_US1_time20110701_bench.nc
setenv BELD4_LU /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/land/beld4_12kmCONUS_2006nlcd_bench.nc
endif
setenv CTM_APPL v521_gcc_SE52BENCH_20110701
setenv S_CGRID /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CGRID_v521_gcc_SE52BENCH_20110701.nc
setenv CTM_CONC_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CONC_v521_gcc_SE52BENCH_20110701.nc -v
setenv A_CONC_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_ACONC_v521_gcc_SE52BENCH_20110701.nc -v
setenv MEDIA_CONC /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_MEDIA_CONC_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_DRY_DEP_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DRYDEP_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_DEPV_DIAG /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPV_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_PT3D_DIAG /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PT3D_v521_gcc_SE52BENCH_20110701.nc -v
setenv B3GTS_S /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_B3GTS_S_v521_gcc_SE52BENCH_20110701.nc -v
setenv SOILOUT /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110701.nc
setenv CTM_WET_DEP_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP1_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_WET_DEP_2 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP2_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_VIS_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMVIS_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_AVIS_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMVIS_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_PMDIAG_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMDIAG_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_APMDIAG_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMDIAG_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_RJ_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG1_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_RJ_2 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG2_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_SSEMIS_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SSEMIS_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_DUST_EMIS_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DUSTEMIS_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_IPR_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_1_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_IPR_2 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_2_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_IPR_3 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_3_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_IRR_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_1_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_IRR_2 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_2_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_IRR_3 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_3_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_DRY_DEP_MOS /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDMOS_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_DRY_DEP_FST /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDFST_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_DEPV_MOS /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVFST_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_DEPV_FST /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVMOS_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_VDIFF_DIAG /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VDIFF_DIAG_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_VSED_DIAG /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VSED_DIAG_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_AOD_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_AOD_DIAG_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_LTNGDIAG_1 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGHRLY_v521_gcc_SE52BENCH_20110701.nc -v
setenv CTM_LTNGDIAG_2 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGCOL_v521_gcc_SE52BENCH_20110701.nc -v
setenv FLOOR_FILE /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/FLOOR_v521_gcc_SE52BENCH_20110701.txt
if ( ! -d /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH ) mkdir -p /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH
set log_test = `ls CTM_LOG_???.${CTM_APPL}`
ls: No match.
set OUT_FILES = ( /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/FLOOR_v521_gcc_SE52BENCH_20110701.txt /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CGRID_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CONC_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_ACONC_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_MEDIA_CONC_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DRYDEP_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPV_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PT3D_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_B3GTS_S_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMVIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMVIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMDIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMDIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SSEMIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DUSTEMIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_3_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_3_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDMOS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDFST_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVFST_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVMOS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VDIFF_DIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VSED_DIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_AOD_DIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGHRLY_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGCOL_v521_gcc_SE52BENCH_20110701.nc -v )
set OUT_FILES = `echo $OUT_FILES | sed "s; -v;;g" `
sed s; -v;;g
echo /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/FLOOR_v521_gcc_SE52BENCH_20110701.txt /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CGRID_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CONC_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_ACONC_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_MEDIA_CONC_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DRYDEP_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPV_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PT3D_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_B3GTS_S_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMVIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMVIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMDIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMDIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SSEMIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DUSTEMIS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_3_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_1_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_2_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_3_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDMOS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDFST_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVFST_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVMOS_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VDIFF_DIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VSED_DIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_AOD_DIAG_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGHRLY_v521_gcc_SE52BENCH_20110701.nc -v /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGCOL_v521_gcc_SE52BENCH_20110701.nc -v
echo /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/FLOOR_v521_gcc_SE52BENCH_20110701.txt /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CGRID_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_ACONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_MEDIA_CONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DRYDEP_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPV_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PT3D_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_B3GTS_S_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMVIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMVIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMDIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMDIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SSEMIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DUSTEMIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_3_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_3_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDMOS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDFST_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVFST_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVMOS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VDIFF_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VSED_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_AOD_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGHRLY_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGCOL_v521_gcc_SE52BENCH_20110701.nc
/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/FLOOR_v521_gcc_SE52BENCH_20110701.txt /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CGRID_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_ACONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_MEDIA_CONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DRYDEP_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPV_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PT3D_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_B3GTS_S_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMVIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMVIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMDIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMDIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SSEMIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DUSTEMIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_3_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_3_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDMOS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDFST_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVFST_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVMOS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VDIFF_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VSED_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_AOD_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGHRLY_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGCOL_v521_gcc_SE52BENCH_20110701.nc
set out_test = `ls $OUT_FILES`
ls /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/FLOOR_v521_gcc_SE52BENCH_20110701.txt /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CGRID_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_ACONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_MEDIA_CONC_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DRYDEP_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPV_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PT3D_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_B3GTS_S_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMVIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMVIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMDIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMDIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SSEMIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DUSTEMIS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_3_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_1_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_2_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_3_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDMOS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDFST_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVFST_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVMOS_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VDIFF_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VSED_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_AOD_DIAG_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGHRLY_v521_gcc_SE52BENCH_20110701.nc /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGCOL_v521_gcc_SE52BENCH_20110701.nc
ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/FLOOR_v521_gcc_SE52BENCH_20110701.txt': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CGRID_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_CONC_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_ACONC_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_MEDIA_CONC_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DRYDEP_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPV_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PT3D_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_B3GTS_S_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SOILOUT_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP1_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_WETDEP2_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMVIS_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMVIS_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PMDIAG_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_APMDIAG_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG1_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PHOTDIAG2_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_SSEMIS_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DUSTEMIS_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_1_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_2_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_PA_3_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_1_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_2_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_IRR_3_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDMOS_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DDFST_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVFST_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_DEPVMOS_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VDIFF_DIAG_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_VSED_DIAG_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_AOD_DIAG_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGHRLY_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?ls: 鏃犳硶璁块棶'/home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/CCTM_LTNGCOL_v521_gcc_SE52BENCH_20110701.nc': 娌℃湁閭ｄ釜鏂囦欢鎴栫洰褰?if ( delete == delete ) then
echo  ancillary log files being deleted
ancillary log files being deleted
foreach file ( )
echo  output files being deleted
output files being deleted
foreach file ( )
else
setenv CTM_STDATE 2011182
setenv CTM_STTIME 000000
setenv CTM_RUNLEN 240000
setenv CTM_TSTEP 010000
setenv EMIS_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/emis/gridded_area/emis_mole_all_20110701_cb6_bench.nc
setenv INIT_GASC_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv INIT_AERO_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv INIT_NONR_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv INIT_TRAC_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/ICON_20110630_bench.nc
setenv BNDY_GASC_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv BNDY_AERO_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv BNDY_NONR_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv BNDY_TRAC_1 /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/icbc/BCON_20110701_bench.nc
setenv OMI /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/OMI_1979_to_2015.dat
setenv OPTICS_DATA /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/PHOT_OPTICS.dat
set TR_DVpath = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip
set TR_DVfile = /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/met/mcip/METCRO2D_110701.nc
setenv gc_matrix_nml /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/GC_cb05e51_ae6_aq.nml
setenv ae_matrix_nml /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/AE_cb05e51_ae6_aq.nml
setenv nr_matrix_nml /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/NR_cb05e51_ae6_aq.nml
setenv tr_matrix_nml /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/Species_Table_TR_0.nml
setenv CSQY_DATA /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/CSQY_DATA_cb05e51_ae6_aq
if ( ! ( -e /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/CSQY_DATA_cb05e51_ae6_aq ) ) then
if ( ! ( -e /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/PHOT_OPTICS.dat ) ) then
ls -l /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/CCTM_v521.exe
-rwxr-xr-x 1 root root 10082208 11鏈?14 22:59 /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/CCTM_v521.exe
size /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/CCTM_v521.exe
   text           data            bss            dec            hex        filename
5642129        4195256        76411624        86249009        5240e31        /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/CCTM_v521.exe
date
2019骞?11鏈?15鏃?鏄熸湡浜?22:12:51 CST
mpirun -np 8 /home/CMAQ-5.2.1/CCTM/scripts/BLD_CCTM_v521_gcc/CCTM_v521.exe
                                                                     
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
     Version with PARMS3.EXT/PARAMETER::MXVARS3= 2048
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
      
     EXECUTION_ID: CCTM_v521.exe
                                                                     
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
                                                                     
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
                                                                     
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
                                                                     
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
                                                                     
                                                                     
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
     This program uses the EPA-AREAL/MCNC-EnvPgms/BAMS Models-3      
     I/O Applications Programming Interface, [I/O API] which is      
     built on top of the netCDF I/O library (Copyright 1993, 1996   
     University Corporation for Atmospheric Research/Unidata         
     Program) and the PVM parallel-programming library (from         
     Oak Ridge National Laboratory).                                 
     Copyright (C) 1992-2002 MCNC,                                   
     (C) 1992-2013 Carlie J. Coats, Jr.,                             
     (C) 2003-2012 Baron Advanced Meteorological Systems, LLC, and   
     (C) 2014-2016 UNC Institute for the Environment.               
     Released under the GNU LGPL  License, version 2.1.  See URL     
                                                                     
         https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html     
                                                                     
     for conditions of use.                                          
                                                                     
     ioapi-3.2: $Id: init3.F90 320 2016-02-26 15:55:00Z coats $
     netCDF version 4.7.0 of Nov 14 2019 18:53:39 $
      
     Value for GRID_NAME:  'SE52BENCH'
     Value for GRID_NAME:  'SE52BENCH'

     File "GRIDDESC" opened for input on unit:  99
     /home/CMAQ-5.2.1/data/SE52BENCH/single_day/cctm_input/GRIDDESC

     Value for IOAPI_CHECK_HEADERS not defined;returning default:   FALSE

===================================================================================
=   BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
=   PID 6580 RUNNING AT pc-virtual-machine
=   EXIT CODE: 139
=   CLEANING UP REMAINING PROCESSES
=   YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
===================================================================================
YOUR APPLICATION TERMINATED WITH THE EXIT STRING: Segmentation fault (signal 11)
This typically refers to a problem with your application.
Please see the FAQ page for debugging suggestions
0.0u 1.3s 0:00.45 320.0% 0+0k 576+56io 0pf+0w
date
2019骞?11鏈?15鏃?鏄熸湡浜?22:12:52 CST
if ( ! -e /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS ) then
mv CTM_LOG_001.v521_gcc_SE52BENCH_20110701 CTM_LOG_002.v521_gcc_SE52BENCH_20110701 CTM_LOG_003.v521_gcc_SE52BENCH_20110701 CTM_LOG_004.v521_gcc_SE52BENCH_20110701 CTM_LOG_005.v521_gcc_SE52BENCH_20110701 CTM_LOG_006.v521_gcc_SE52BENCH_20110701 CTM_LOG_007.v521_gcc_SE52BENCH_20110701 /home/CMAQ-5.2.1/data/output_CCTM_v521_gcc_SE52BENCH/LOGS
setenv NEW_START false
set TODAYG = `date -ud "${TODAYG}+1days" +%Y-%m-%d`
date -ud 2011-07-01+1days +%Y-%m-%d
set TODAYJ = `date -ud "${TODAYG}" +%Y%j`
date -ud 2011-07-02 +%Y%j
end
while ( 2011183 < = 2011182 )
exit

xinshou6

请问你咋下来的 什么方法 下到3g就限额了 5.3的你要能下吗 能否把5.2的发我一份谢谢

physzw

楼主最后怎么运行成功了？

physzw

我用的5.3，也是这个错误

JicuiCui

楼主最后运行成功了吗

pcc

换了intel编译器，并且换到了centos 上，好了。

来自苹果APP客户端

surewinhao

楼主，我也是这个错误，请问你怎么解决的

chenjiao997

请问最后解决了吗？怎么解决呀？