如何在shell脚本中调用NCL（conda版本）[已解决]

channam

江湖救急呀

因为在linux上安装的ncl为anaconda版本的，我在linux里每次运行ncl，需要输入命令conda activate ncl_stable ，激活ncl环境。
运行完ncl脚本，再conda deactivate，退出ncl环境。

现在想在shell脚本里运行ncl脚本

但是在shell脚本里写 conda activate ncl_stable  和  conda deactivate，会报错，请问有没有解决的办法呀？？？

脚本：
#!/bin/bash
conda activate ncl_stable

......
ncl hynout_txt.ncl
conda deactivate


报错：
CommandNotFoundError: Your shell has not been properly configured to use 'conda activate'.
To initialize your shell, run

    $ conda init <SHELL_NAME>

Currently supported shells are:
  - bash
  - fish
  - tcsh
  - xonsh
  - zsh
  - powershell

See 'conda init --help' for more information and options.

IMPORTANT: You may need to close and restart your shell after running 'conda init'.


autochem_out.sh: line 101: ncl: command not found

CommandNotFoundError: Your shell has not been properly configured to use 'conda deactivate'.
To initialize your shell, run

    $ conda init <SHELL_NAME>

Currently supported shells are:
  - bash
  - fish
  - tcsh
  - xonsh
  - zsh
  - powershell

See 'conda init --help' for more information and options.

IMPORTANT: You may need to close and restart your shell after running 'conda init'.

------------------------------------------------------------------------------------------------------------------
解决方法：在shell脚本里最上面添加 source ~/.bashrc 即可。

#!/bin/bashsource ~/.bashrc
conda activate ncl_stable

......
ncl hynout_txt.ncl
conda deactivate

名字真难取

source /path/anaconda/bin/activate env_name

channam

名字真难取 发表于 2022-6-29 18:58
source /path/anaconda/bin/activate env_name

谢谢回复，看到你这个source，我就在shell脚本里添加source ~/.bashrc 就解决了。