WRF在服务器上安装时出现错误，求教！！！

木子肃文

3.  Linux x86_64, PGI compiler with gcc  (dmpar)

./compile em_real 后出现了如下内容

None of WRF_EM_CORE, WRF_NMM_CORE,
        specified in shellenvironment....

Compiling: WRF_EM_CORE .

setting parallel make -j 2
make: Warning: File `configure.wrf' has modification time 1.2e+02 s in thefuture
make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include " ext
make[1]: Entering directory `/home/lixf/soft/WRFV3'
make[1]: Warning: File `configure.wrf' has modification time 1.2e+02 s in thefuture
--------------------------------------
( cd frame ; make -i -r externals )
make[2]: Entering directory `/home/lixf/soft/WRFV3/frame'
make[2]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
( cd /home/lixf/soft/WRFV3/external/ioapi_share ; \
          make -i -rNATIVE_RWORDSIZE="4" RWORDSIZE="4" AR="ar"ARFLAGS="ru" )
make[3]: Entering directory `/home/lixf/soft/WRFV3/external/ioapi_share'
make[3]: Warning: File `../../inc/wrf_io_flags.h' has modification time 1.3e+02s in the future
make[3]: Nothing to be done for `all'.
make[3]: warning:  Clock skewdetected.  Your build may beincomplete.
make[3]: Leaving directory `/home/lixf/soft/WRFV3/external/ioapi_share'
( cd /home/lixf/soft/WRFV3/external/io_grib_share ; \
          make CC="gcc"CFLAGS="-w -O3 -DDM_PARALLEL -DMAX_HISTORY=25" RM="rm -f"RANLIB="ranlib" CPP="/lib/cpp -C -P" \
          FC="pgf90 -r4 -i4 -I.  -w -Mfree -byteswapio   " TRADFLAG="-traditional"AR="ar" ARFLAGS="ru" archive)
make[3]: Entering directory`/home/lixf/soft/WRFV3/external/io_grib_share'
make[4]: Entering directory`/home/lixf/soft/WRFV3/external/io_grib_share'
ar ru ./libio_grib_share.a io_grib_share.o get_region_center.o gridnav.oopen_file.o
ranlib ./libio_grib_share.a
make[4]: Leaving directory `/home/lixf/soft/WRFV3/external/io_grib_share'
make[3]: Leaving directory `/home/lixf/soft/WRFV3/external/io_grib_share'
( cd /home/lixf/soft/WRFV3/external/io_grib1 ; \
          make CC="gcc"CFLAGS="-w -O3 -DDM_PARALLEL -DMAX_HISTORY=25" RM="rm -f"RANLIB="ranlib" CPP="/lib/cpp -C -P" \
          FC="pgf90 -r4 -i4 -I.  -w -Mfree -byteswapio   " TRADFLAG="-traditional"AR="ar" ARFLAGS="ru" archive)
make[3]: Entering directory `/home/lixf/soft/WRFV3/external/io_grib1'
        Doing make archive on librarysubdirectory MEL_grib1
make[4]: Entering directory`/home/lixf/soft/WRFV3/external/io_grib1/MEL_grib1'
make[5]: Entering directory`/home/lixf/soft/WRFV3/external/io_grib1/MEL_grib1'
ar ru ../libio_grib1.a FTP_getfile.o apply_bitmap.o display_gribhdr.o gbyte.ogrib_dec.o grib_enc.o grib_seek.o gribgetbds.o gribgetbms.o gribgetgds.ogribgetpds.o gribhdr2file.o gribputbds.o gribputgds.o gribputpds.o hdr_print.oinit_dec_struct.o init_enc_struct.o init_gribhdr.o init_struct.o ld_dec_lookup.old_enc_input.o ld_enc_lookup.o ld_grib_origctrs.o make_default_grbfn.omake_grib_log.o map_lvl.o map_parm.o pack_spatial.o prt_inp_struct.oupd_child_errmsg.o prt_badmsg.o swap.o grib_uthin.o set_bytes.o
ranlib ../libio_grib1.a
make[5]: Leaving directory `/home/lixf/soft/WRFV3/external/io_grib1/MEL_grib1'
make[4]: Leaving directory`/home/lixf/soft/WRFV3/external/io_grib1/MEL_grib1'
        Doing make archive on librarysubdirectory grib1_util
make[4]: Entering directory `/home/lixf/soft/WRFV3/external/io_grib1/grib1_util'
make[5]: Entering directory`/home/lixf/soft/WRFV3/external/io_grib1/grib1_util'
ar ru ../libio_grib1.a alloc_2d.o read_grib.o write_grib.o
ranlib ../libio_grib1.a
make[5]: Leaving directory `/home/lixf/soft/WRFV3/external/io_grib1/grib1_util'
make[4]: Leaving directory`/home/lixf/soft/WRFV3/external/io_grib1/grib1_util'
        Doing make archive on librarysubdirectory WGRIB
make[4]: Entering directory`/home/lixf/soft/WRFV3/external/io_grib1/WGRIB'
make[4]: Nothing to be done for `archive'.
make[4]: Leaving directory`/home/lixf/soft/WRFV3/external/io_grib1/WGRIB'
make[4]: Entering directory `/home/lixf/soft/WRFV3/external/io_grib1'
ar ru ./libio_grib1.a grib1_routines.o gribmap.o io_grib1.o trim.o
ranlib ./libio_grib1.a
make[4]: Leaving directory `/home/lixf/soft/WRFV3/external/io_grib1'
make[3]: Leaving directory `/home/lixf/soft/WRFV3/external/io_grib1'
( cd /home/lixf/soft/WRFV3/external/io_int ; \
          make CC="mpicc  -DFSEEKO64_OK " RM="rm -f"RANLIB="ranlib" CPP="/lib/cpp -C -P" \
          FC="pgf90 -r4 -i4  -w -Mfree -byteswapio  " FGREP="fgrep -iq" \
         TRADFLAG="-traditional" AR="ar"ARFLAGS="ru" ARCHFLAGS="-DEM_CORE=1 -DNMM_CORE=0-DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4-DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR  -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES-DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21-DMAX_HISTORY=25 -DNMM_NEST=0" all )
make[3]: Entering directory `/home/lixf/soft/WRFV3/external/io_int'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/home/lixf/soft/WRFV3/external/io_int'
( cd /home/lixf/soft/WRFV3/external/esmf_time_f90 ; \
          make FC="pgf90 -r4-i4  -w -Mfree -byteswapio  " RANLIB="ranlib" \
          CPP="/lib/cpp -C -P-I/home/lixf/soft/WRFV3/inc -I. -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600-DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8-DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR  -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES-DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21-DMAX_HISTORY=25 -DNMM_NEST=0 -traditional" AR="ar"ARFLAGS="ru" )
make[3]: Entering directory`/home/lixf/soft/WRFV3/external/esmf_time_f90'
make[3]: Nothing to be done for `default'.
make[3]: Leaving directory `/home/lixf/soft/WRFV3/external/esmf_time_f90'
( cd /home/lixf/soft/WRFV3/external/fftpack/fftpack5 ; \
          make FC="pgf90"FFLAGS="-r4 -i4  -w -Mfree-byteswapio  "RANLIB="ranlib" AR="ar" ARFLAGS="ru" )
make[3]: Entering directory`/home/lixf/soft/WRFV3/external/fftpack/fftpack5'
ar ru libfftpack.a c1f2kb.o c1f2kf.o c1f3kb.o c1f3kf.o c1f4kb.o c1f4kf.oc1f5kb.o c1f5kf.o c1fgkb.o c1fgkf.o c1fm1b.o c1fm1f.o cfft1b.o cfft1f.ocfft1i.o cfft2b.o cfft2f.o cfft2i.o cfftmb.o cfftmf.o cfftmi.o cmf2kb.ocmf2kf.o cmf3kb.o cmf3kf.o cmf4kb.o cmf4kf.o cmf5kb.o cmf5kf.o cmfgkb.ocmfgkf.o cmfm1b.o cmfm1f.o cosq1b.o cosq1f.o cosq1i.o cosqb1.o cosqf1.ocosqmb.o cosqmf.o cosqmi.o cost1b.o cost1f.o cost1i.o costb1.o costf1.o costmb.ocostmf.o costmi.o factor.o mcfti1.o mcsqb1.o mcsqf1.o mcstb1.o mcstf1.omradb2.o mradb3.o mradb4.o mradb5.o mradbg.o mradf2.o mradf3.o mradf4.omradf5.o mradfg.o mrftb1.o mrftf1.o mrfti1.o msntb1.o msntf1.o r1f2kb.or1f2kf.o r1f3kb.o r1f3kf.o r1f4kb.o r1f4kf.o r1f5kb.o r1f5kf.o r1fgkb.or1fgkf.o rfft1b.o rfft1f.o rfft1i.o rfft2b.o rfft2f.o rfft2i.o rfftb1.orfftf1.o rffti1.o rfftmb.o rfftmf.o rfftmi.o sinq1b.o sinq1f.o sinq1i.osinqmb.o sinqmf.o sinqmi.o sint1b.o sint1f.o sint1i.o sintb1.o sintf1.o sintmb.osintmf.o sintmi.o tables.o xercon.o xerfft.o
ranlib libfftpack.a
make[3]: Leaving directory`/home/lixf/soft/WRFV3/external/fftpack/fftpack5'
( cd /home/lixf/soft/WRFV3/external/io_netcdf ; \
          makeNETCDFPATH="/opt/netcdf/4.1.3/pgi" RANLIB="ranlib"CPP="/lib/cpp -C -P" \
          CC="gcc"CFLAGS="-w -O3 -DDM_PARALLEL -DMAX_HISTORY=25" \
          FC="pgf90 -r4 -i4 -O3  -w -Mfree -byteswapio  " TRADFLAG="-traditional"AR="ar" ARFLAGS="ru" )
make[3]: Entering directory `/home/lixf/soft/WRFV3/external/io_netcdf'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/home/lixf/soft/WRFV3/external/io_netcdf'
( if [ ! -e /home/lixf/soft/WRFV3/tools/gen_comms.c ] ; then \
          /bin/cp/home/lixf/soft/WRFV3/tools/gen_comms_warning /home/lixf/soft/WRFV3/tools/gen_comms.c; \
          cat/home/lixf/soft/WRFV3/external/RSL_LITE/gen_comms.c >>/home/lixf/soft/WRFV3/tools/gen_comms.c ; fi )
( if [ ! -e module_dm.F ] ; then /bin/cp module_dm_warning module_dm.F ;\
          cat /home/lixf/soft/WRFV3/external/RSL_LITE/module_dm.F>> module_dm.F ; fi )
make[2]: warning:  Clock skewdetected.  Your build may beincomplete.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/frame'
make[1]: warning:  Clock skewdetected.  Your build may be incomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3'
make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include " toolsdir
make[1]: Entering directory `/home/lixf/soft/WRFV3'
make[1]: Warning: File `configure.wrf' has modification time 1.2e+02 s in thefuture
--------------------------------------
( cd tools ; make -i -r CC_TOOLS="gcc -DIWORDSIZE=4 -DMAX_HISTORY=25" )
make[2]: Entering directory `/home/lixf/soft/WRFV3/tools'
make[2]: `registry' is up to date.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/tools'
make[1]: warning:  Clock skewdetected.  Your build may beincomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3'
/bin/rm -f main/libwrflib.a main/libwrflib.lib
make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include " framework
make[1]: Entering directory `/home/lixf/soft/WRFV3'
make[1]: Warning: File `configure.wrf' has modification time 1.2e+02 s in thefuture
--------------------------------------
( cd frame ; make -i -r -j 2 framework; \
          cd ../external/io_netcdf ;\
          make -i -rNETCDFPATH="/opt/netcdf/4.1.3/pgi" FC="pgf90 -w -Mfree-byteswapio  "RANLIB="ranlib" \
               CPP="/lib/cpp -C-P" LDFLAGS=" -O3  -w -Mfree-byteswapio    "TRADFLAG="-traditional" ESMF_IO_LIB_EXT="-L/home/lixf/soft/WRFV3/external/esmf_time_f90-lesmf_time" \
               ESMF_MOD_DEPENDENCE="/home/lixf/soft/WRFV3/external/esmf_time_f90/module_utility.o"AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR" diffwrf; \
          cd ../io_int ; \
          make -i -r SFC="pgf90 -w-Mfree -byteswapio  " FC="pgf90-w -Mfree -byteswapio  "RANLIB="ranlib" CPP="/lib/cpp -C -P" \
              TRADFLAG="-traditional"ESMF_IO_LIB_EXT="-L/home/lixf/soft/WRFV3/external/esmf_time_f90-lesmf_time" \
              ESMF_MOD_DEPENDENCE="/home/lixf/soft/WRFV3/external/esmf_time_f90/module_utility.o"AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR" diffwrf ; \
          cd ../../frame )
make[2]: Entering directory `/home/lixf/soft/WRFV3/frame'
make[2]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
ar ru ../main/libwrflib.a module_driver_constants.o module_domain_type.omodule_streams.o module_domain.o module_integrate.o module_timing.omodule_configure.o module_tiles.o module_machine.o module_nesting.omodule_wrf_error.o module_state_description.o module_sm.o module_io.omodule_comm_dm.o module_comm_dm_0.o module_comm_dm_1.o module_comm_dm_2.omodule_comm_dm_3.o module_comm_dm_4.o module_comm_nesting_dm.o module_dm.omodule_quilt_outbuf_ops.o module_io_quilt.o wrf_num_bytes_between.owrf_shutdown.o wrf_debug.o libmassv.o collect_on_comm.o hires_timer.onl_get_0_routines.o nl_get_1_routines.o nl_get_2_routines.o nl_get_3_routines.onl_get_4_routines.o nl_get_5_routines.o nl_get_6_routines.o nl_get_7_routines.onl_set_0_routines.o nl_set_1_routines.o nl_set_2_routines.o nl_set_3_routines.onl_set_4_routines.o nl_set_5_routines.o nl_set_6_routines.onl_set_7_routines.o module_alloc_space_0.o module_alloc_space_1.o module_alloc_space_2.omodule_alloc_space_3.o module_alloc_space_4.o module_alloc_space_5.o module_alloc_space_6.omodule_alloc_space_7.o module_alloc_space_8.o module_alloc_space_9.o
ar: creating ../main/libwrflib.a
ranlib ../main/libwrflib.a
make[2]: warning:  Clock skewdetected.  Your build may beincomplete.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/frame'
make[2]: Entering directory `/home/lixf/soft/WRFV3/external/io_netcdf'
make[2]: `diffwrf' is up to date.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/external/io_netcdf'
make[2]: Entering directory `/home/lixf/soft/WRFV3/external/io_int'
make[2]: `diffwrf' is up to date.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/external/io_int'
make[1]: warning:  Clock skewdetected.  Your build may beincomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3'
make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include " shared
make[1]: Entering directory `/home/lixf/soft/WRFV3'
make[1]: Warning: File `configure.wrf' has modification time 1.2e+02 s in thefuture
--------------------------------------
( cd share ; make -i -r -j 2 )
make[2]: Entering directory `/home/lixf/soft/WRFV3/share'
make[2]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
if [ 0 -eq 1 ] ; then \
                  make -i -rnmm_contrib                                     ; \
                  ar ru../main/libwrflib.a module_bc.o module_bc_time_utilities.o module_io_wrf.omodule_date_time.o module_get_file_names.o module_io_domain.o module_model_constants.omodule_MPP.o module_optional_input.o module_compute_geop.o module_soil_pre.omodule_check_a_mundo.o module_random.o module_llxy.o dfi.omediation_integrate.o mediation_interp_domain.o mediation_force_domain.omediation_feedback_domain.o mediation_nest_move.o mediation_wrfmain.osolve_interface.o start_domain.o init_modules.o set_timekeeping.o interp_fcn.osint.o input_wrf.o output_wrf.o wrf_timeseries.o wrf_ext_write_field.owrf_ext_read_field.o wrf_bdyout.o wrf_fddaobs_in.o wrf_bdyin.o wrf_tsin.olandread.o track_driver.o track_input.o bobrand.o setfeenv.o   ; \
                  else                                                        \
                  ar ru../main/libwrflib.a module_bc.o module_bc_time_utilities.o module_io_wrf.omodule_date_time.o module_get_file_names.o module_io_domain.omodule_model_constants.o module_MPP.o module_optional_input.omodule_compute_geop.o module_soil_pre.o module_check_a_mundo.o module_random.omodule_llxy.o dfi.o mediation_integrate.o mediation_interp_domain.omediation_force_domain.o mediation_feedback_domain.o mediation_nest_move.omediation_wrfmain.o solve_interface.o start_domain.o init_modules.oset_timekeeping.o interp_fcn.o sint.o input_wrf.o output_wrf.o wrf_timeseries.owrf_ext_write_field.o wrf_ext_read_field.o wrf_bdyout.o wrf_fddaobs_in.owrf_bdyin.o wrf_tsin.o landread.o track_driver.o track_input.o bobrand.osetfeenv.o             ; \
                fi
make[2]: warning:  Clock skewdetected.  Your build may beincomplete.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/share'
make[1]: warning:  Clock skewdetected.  Your build may beincomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3'
make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/esmf_time_f90  -I/home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include "physics
make[1]: Entering directory `/home/lixf/soft/WRFV3'
make[1]: Warning: File `configure.wrf' has modification time 1.2e+02 s in thefuture
--------------------------------------
( cd phys ; make -i -r  -j 2 )
make[2]: Entering directory `/home/lixf/soft/WRFV3/phys'
make[2]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
if [ 0 -eq 1 ] ; then \
                  make -i -rnmm_contrib                                      ; \
                  ar ru../main/libwrflib.a module_cam_shr_kind_mod.o module_cam_support.omodule_cam_shr_const_mod.o module_cam_physconst.o module_cam_cldwat.omodule_cam_wv_saturation.o module_cam_esinti.o module_cam_gffgch.omodule_cam_error_function.o module_cam_constituents.omodule_cam_trb_mtn_stress.o module_cam_molec_diff.o module_cam_upper_bc.omodule_cam_bl_diffusion_solver.o module_cam_bl_eddy_diff.o module_bl_ysu.omodule_bl_mrf.o module_bl_gfs.o module_bl_gfs2011.o module_bl_myjpbl.omodule_bl_qnsepbl.o module_bl_qnsepbl09.o module_bl_acm.o module_bl_mynn.omodule_bl_gwdo.o module_bl_myjurb.o module_bl_boulac.omodule_bl_camuwpbl_driver.o module_bl_mfshconvpbl.omodule_cu_camuwshcu_driver.o module_cu_camuwshcu.o module_cu_camzm_driver.omodule_cu_camzm.o module_bl_temf.o module_cu_g3.o module_cu_kf.omodule_cu_bmj.o module_cu_kfeta.o module_cu_tiedtke.o module_cu_gd.omodule_cu_nsas.o module_cu_sas.o module_cu_osas.o module_mp_kessler.omodule_mp_lin.o module_mp_sbu_ylin.o module_mp_wsm3.o module_mp_wsm5.omodule_mp_wsm6.o module_mp_etanew.o module_mp_etaold.o module_mp_HWRF.omodule_mp_thompson.o module_mp_gsfcgce.o module_mp_morr_two_moment.omodule_mp_milbrandt2mom.o module_mp_nssl_2mom.o module_mp_wdm5.o module_mp_wdm6.omodule_ra_sw.o module_ra_gsfcsw.o module_ra_goddard.o module_ra_rrtm.omodule_ra_rrtmg_lw.o module_ra_rrtmg_sw.o module_ra_cam_support.omodule_ra_cam.o module_ra_gfdleta.o module_ra_flg.o module_ra_HWRF.omodule_ra_hs.o module_sf_sfclay.o module_sf_sfclayrev.o module_sf_gfs.omodule_sf_gfdl.o module_sf_slab.o module_sf_noahdrv.o module_sf_noahlsm.omodule_sf_ssib.o module_sf_noah_seaice.o module_sf_noah_seaice_drv.omodule_sf_noahlsm_glacial_only.o module_sf_noahmpdrv.o module_sf_noahmplsm.omodule_sf_urban.o module_sf_bep.o module_sf_bep_bem.o module_sf_bem.omodule_sf_pxlsm.o module_sf_pxlsm_data.o module_sf_ruclsm.omodule_sf_sfcdiags.o module_sf_sfcdiags_ruclsm.o module_sf_sstskin.omodule_sf_tmnupdate.o module_sf_oml.o module_sf_myjsfc.o module_sf_qnsesfc.omodule_sf_mynn.o module_sf_pxsfclay.o module_sf_temfsfclay.omodule_sf_idealscmsfclay.o module_sf_scmflux.o module_sf_scmskintemp.omodule_physics_addtendc.o module_physics_init.o module_gfs_machine.omodule_gfs_funcphys.o module_gfs_physcons.o module_progtm.o module_pbl_driver.omodule_data_gocart_dust.o module_cumulus_driver.o module_shallowcu_driver.omodule_microphysics_driver.o module_microphysics_zero_out.omodule_mixactivate.o module_radiation_driver.o module_surface_driver.o module_diagnostics.omodule_fdda_psufddagd.o module_fdda_spnudging.o module_fddagd_driver.omodule_fddaobs_rtfdda.o module_fddaobs_driver.o module_wind_generic.omodule_wind_fitch.o    ; \
                else                                                        \
                  make -i -r non_nmm                                          ;\
                  ar ru../main/libwrflib.a module_cam_shr_kind_mod.o module_cam_support.omodule_cam_shr_const_mod.o module_cam_physconst.o module_cam_cldwat.o module_cam_wv_saturation.omodule_cam_esinti.o module_cam_gffgch.o module_cam_error_function.omodule_cam_constituents.o module_cam_trb_mtn_stress.o module_cam_molec_diff.omodule_cam_upper_bc.o module_cam_bl_diffusion_solver.omodule_cam_bl_eddy_diff.o module_bl_ysu.o module_bl_mrf.o module_bl_gfs.omodule_bl_gfs2011.o module_bl_myjpbl.o module_bl_qnsepbl.omodule_bl_qnsepbl09.o module_bl_acm.o module_bl_mynn.o module_bl_gwdo.omodule_bl_myjurb.o module_bl_boulac.o module_bl_camuwpbl_driver.omodule_bl_mfshconvpbl.o module_cu_camuwshcu_driver.o module_cu_camuwshcu.omodule_cu_camzm_driver.o module_cu_camzm.o module_bl_temf.o module_cu_g3.omodule_cu_kf.o module_cu_bmj.o module_cu_kfeta.o module_cu_tiedtke.omodule_cu_gd.o module_cu_nsas.o module_cu_sas.o module_cu_osas.omodule_mp_kessler.o module_mp_lin.o module_mp_sbu_ylin.o module_mp_wsm3.omodule_mp_wsm5.o module_mp_wsm6.o module_mp_etanew.o module_mp_etaold.omodule_mp_HWRF.o module_mp_thompson.o module_mp_gsfcgce.omodule_mp_morr_two_moment.o module_mp_milbrandt2mom.o module_mp_nssl_2mom.omodule_mp_wdm5.o module_mp_wdm6.o module_ra_sw.o module_ra_gsfcsw.omodule_ra_goddard.o module_ra_rrtm.o module_ra_rrtmg_lw.o module_ra_rrtmg_sw.omodule_ra_cam_support.o module_ra_cam.o module_ra_gfdleta.o module_ra_flg.omodule_ra_HWRF.o module_ra_hs.o module_sf_sfclay.o module_sf_sfclayrev.omodule_sf_gfs.o module_sf_gfdl.o module_sf_slab.o module_sf_noahdrv.omodule_sf_noahlsm.o module_sf_ssib.o module_sf_noah_seaice.omodule_sf_noah_seaice_drv.o module_sf_noahlsm_glacial_only.omodule_sf_noahmpdrv.o module_sf_noahmplsm.o module_sf_urban.o module_sf_bep.omodule_sf_bep_bem.o module_sf_bem.o module_sf_pxlsm.o module_sf_pxlsm_data.omodule_sf_ruclsm.o module_sf_sfcdiags.o module_sf_sfcdiags_ruclsm.omodule_sf_sstskin.o module_sf_tmnupdate.o module_sf_oml.o module_sf_myjsfc.omodule_sf_qnsesfc.o module_sf_mynn.o module_sf_pxsfclay.omodule_sf_temfsfclay.o module_sf_idealscmsfclay.o module_sf_scmflux.omodule_sf_scmskintemp.o module_physics_addtendc.o module_physics_init.o module_gfs_machine.omodule_gfs_funcphys.o module_gfs_physcons.o module_progtm.o module_pbl_driver.omodule_data_gocart_dust.o module_cumulus_driver.o module_shallowcu_driver.omodule_microphysics_driver.o module_microphysics_zero_out.o module_mixactivate.omodule_radiation_driver.o module_surface_driver.o module_diagnostics.omodule_fdda_psufddagd.o module_fdda_spnudging.o module_fddagd_driver.omodule_fddaobs_rtfdda.o module_fddaobs_driver.o module_wind_generic.omodule_wind_fitch.o module_fr_sfire_driver.o module_fr_sfire_driver_wrf.omodule_fr_sfire_atm.o module_fr_sfire_model.o module_fr_sfire_core.omodule_fr_sfire_phys.o module_fr_sfire_util.o              ; \
                fi
make[3]: Entering directory `/home/lixf/soft/WRFV3/phys'
make[3]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
rm -f module_physics_init.o
/lib/cpp -C -P -I/home/lixf/soft/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0-DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4-DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR  -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES-DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21-DMAX_HISTORY=25 -DNMM_NEST=0  -I.-traditional   module_physics_init.F  > module_physics_init.bb
/home/lixf/soft/WRFV3/tools/standard.exe module_physics_init.bb | /lib/cpp -C-P > module_physics_init.f90
rm -f module_physics_init.b module_physics_init.bb
mpif90  -c -r4 -i4  -O0 -w -Mfree -byteswapio   -I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame -I/home/lixf/soft/WRFV3/share-I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include  module_physics_init.f90
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[3]: [module_physics_init.o] Error 127 (ignored)
make[3]: warning:  Clock skewdetected.  Your build may beincomplete.
make[3]: Leaving directory `/home/lixf/soft/WRFV3/phys'
ar: module_physics_init.o: No such file or directory
make[2]: [physics] Error 1 (ignored)
make[2]: warning:  Clock skewdetected.  Your build may beincomplete.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/phys'
make[1]: warning:  Clock skewdetected.  Your build may beincomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3'
if [ 0  -eq 1 ]    ; then make -i -rMODULE_DIRS="-I../dyn_em -I../dyn_nmm -module /home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/esmf_time_f90  -I/home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/io_netcdf -I/home/lixf/soft/WRFV3/external/io_int-I/home/lixf/soft/WRFV3/frame -I/home/lixf/soft/WRFV3/share-I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include " chemics ;fi
if [ 1 -eq 1 ]    ; then make -i -rMODULE_DIRS="-I../dyn_em -I../dyn_nmm -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include " em_core ; fi
make[1]: Entering directory `/home/lixf/soft/WRFV3'
make[1]: Warning: File `configure.wrf' has modification time 1.2e+02 s in thefuture
--------------------------------------
if [ 0  -eq 0 ] ; then \
        CF= ; \
    else \
     CF="../chem/module_aerosols_sorgam.o../chem/module_gocart_aerosols.o ../chem/module_mosaic_driver.o../chem/module_input_tracer.o" ; \
    fi
( cd dyn_em ; make -i -r -j 2 CF="" )
make[2]: Entering directory `/home/lixf/soft/WRFV3/dyn_em'
make[2]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
rm -f module_first_rk_step_part1.o
rm -f ../phys/module_physics_init.o
/lib/cpp -C -P -I/home/lixf/soft/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0-DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4-DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR  -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1-DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25-DNMM_NEST=0  -I. -traditional   ../phys/module_physics_init.F  > ../phys/module_physics_init.bb
/lib/cpp -C -P -I/home/lixf/soft/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600-DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8-DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR  -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES-DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25-DNMM_NEST=0  -I. -traditional   module_first_rk_step_part1.F  > module_first_rk_step_part1.bb
/home/lixf/soft/WRFV3/tools/standard.exe module_first_rk_step_part1.bb |/lib/cpp -C -P > module_first_rk_step_part1.f90
/home/lixf/soft/WRFV3/tools/standard.exe ../phys/module_physics_init.bb |/lib/cpp -C -P > ../phys/module_physics_init.f90
rm -f module_first_rk_step_part1.b module_first_rk_step_part1.bb
rm -f ../phys/module_physics_init.b ../phys/module_physics_init.bb
if fgrep -iq '!$OMP' module_first_rk_step_part1.f90 ; then \
          if [ -n "" ] ; thenecho COMPILING module_first_rk_step_part1.F WITH OMP ; fi ; \
     mpif90  -omodule_first_rk_step_part1.o -c -O3  -w-Mfree -byteswapio    -I../dyn_em-I../dyn_nmm  -module/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/esmf_time_f90  -I/home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include  -r4 -i4 module_first_rk_step_part1.f90 ; \
        else \
          if [ -n "" ] ; thenecho COMPILING module_first_rk_step_part1.F WITHOUT OMP ; fi ; \
     mpif90  -omodule_first_rk_step_part1.o -c -O3  -w-Mfree -byteswapio   -I../dyn_em-I../dyn_nmm  -module/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/esmf_time_f90  -I/home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/io_netcdf -I/home/lixf/soft/WRFV3/external/io_int-I/home/lixf/soft/WRFV3/frame -I/home/lixf/soft/WRFV3/share-I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include  -r4 -i4 module_first_rk_step_part1.f90 ; \
        fi
if fgrep -iq '!$OMP' ../phys/module_physics_init.f90 ; then \
          if [ -n "" ] ; thenecho COMPILING ../phys/module_physics_init.F WITH OMP ; fi ; \
     mpif90  -o../phys/module_physics_init.o -c -O3  -w-Mfree -byteswapio    -I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include  -r4-i4  ../phys/module_physics_init.f90 ;\
        else \
          if [ -n "" ] ; thenecho COMPILING ../phys/module_physics_init.F WITHOUT OMP ; fi ; \
     mpif90  -o../phys/module_physics_init.o -c -O3  -w-Mfree -byteswapio   -I../dyn_em-I../dyn_nmm  -module/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/esmf_time_f90  -I/home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include  -r4-i4  ../phys/module_physics_init.f90 ;\
        fi
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[2]: [module_first_rk_step_part1.o] Error 127 (ignored)
rm -f solve_em.o
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
/lib/cpp -C -P -I/home/lixf/soft/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0-DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4-DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR  -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES-DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21-DMAX_HISTORY=25 -DNMM_NEST=0  -I.-traditional   solve_em.F  > solve_em.bb
make[2]: [../phys/module_physics_init.o] Error 127 (ignored)
rm -f start_em.o
/home/lixf/soft/WRFV3/tools/standard.exe start_em.F > start_em.b
/home/lixf/soft/WRFV3/tools/standard.exe solve_em.bb | /lib/cpp -C -P >solve_em.f90
/lib/cpp -C -P -I/home/lixf/soft/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0-DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4-DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR  -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES-DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21-DMAX_HISTORY=25 -DNMM_NEST=0  -I.-traditional   start_em.b  > start_em.f90
rm -f solve_em.b solve_em.bb
rm -f start_em.b
if fgrep -iq '!$OMP' solve_em.f90 ; then \
          if [ -n "" ] ; thenecho COMPILING solve_em.F WITH OMP ; fi ; \
     mpif90  -o solve_em.o -c -O3  -w -Mfree -byteswapio    -I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include  -r4 -i4  solve_em.f90 ; \
        else \
          if [ -n "" ] ; then echoCOMPILING solve_em.F WITHOUT OMP ; fi ; \
     mpif90  -o solve_em.o -c -O3  -w -Mfree -byteswapio   -I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include  -r4 -i4 solve_em.f90 ; \
        fi
if fgrep -iq '!$OMP' start_em.f90 ; then \
          if [ -n "" ] ; thenecho COMPILING start_em.F WITH OMP ; fi ; \
     mpif90  -c -r4 -i4 -O0 -w -Mfree-byteswapio   -I../dyn_em-I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include   start_em.f90 ; \
        else \
          if [ -n "" ] ; thenecho COMPILING start_em.F WITHOUT OMP ; fi ; \
     mpif90  -c -r4 -i4 -O0 -w -Mfree-byteswapio   -I../dyn_em-I../dyn_nmm  -module/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/esmf_time_f90  -I/home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include  start_em.f90 ; \
        fi
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[2]: [solve_em.o] Error 127 (ignored)
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[2]: [start_em.o] Error 127 (ignored)
ar ru ../main/libwrflib.a module_advect_em.o module_diffusion_em.omodule_small_step_em.o module_big_step_utilities_em.o module_em.omodule_solvedebug_em.o module_bc_em.o module_init_utilities.omodule_wps_io_arw.o module_damping_em.o module_polarfft.o module_force_scm.omodule_first_rk_step_part1.o module_first_rk_step_part2.o module_avgflx_em.omodule_sfs_nba.o module_convtrans_prep.o module_sfs_driver.omodule_stoch.o  init_modules_em.osolve_em.o start_em.o shift_domain_em.o couple_or_uncouple_em.o nest_init_utils.oadapt_timestep_em.o interp_domain_em.o
ar: module_first_rk_step_part1.o: No such file or directory
make[2]: [dyn_em] Error 1 (ignored)
make[2]: warning:  Clock skewdetected.  Your build may beincomplete.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/dyn_em'
make[1]: warning:  Clock skewdetected.  Your build may beincomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3'
if [ 0 -eq 1 ]   ; then make -i -rMODULE_DIRS="-I../dyn_em -I../dyn_nmm -module /home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/esmf_time_f90  -I/home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include " nmm_core ;fi
if [ 0 -eq 1 ]   ; then make -i -rMODULE_DIRS="-I../dyn_em -I../dyn_nmm -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include" exp_core ; fi
( cd main ; make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include " SOLVER=em em_wrf )
make[1]: Entering directory `/home/lixf/soft/WRFV3/main'
make[1]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
ranlib libwrflib.a
mpif90  -o wrf.exe  -O3  -w-Mfree -byteswapio     wrf.o../main/module_wrf_top.o libwrflib.a /home/lixf/soft/WRFV3/external/fftpack/fftpack5/libfftpack.a/home/lixf/soft/WRFV3/external/io_grib1/libio_grib1.a/home/lixf/soft/WRFV3/external/io_grib_share/libio_grib_share.a/home/lixf/soft/WRFV3/external/io_int/libwrfio_int.a-L/home/lixf/soft/WRFV3/external/esmf_time_f90 -lesmf_time/home/lixf/soft/WRFV3/external/RSL_LITE/librsl_lite.a/home/lixf/soft/WRFV3/frame/module_internal_header_util.o/home/lixf/soft/WRFV3/frame/pack_utils.o -L/home/lixf/soft/WRFV3/external/io_netcdf -lwrfio_nf-L/opt/netcdf/4.1.3/pgi/lib -lnetcdff -lnetcdf     
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[1]: [em_wrf] Error 127 (ignored)
make[1]: warning:  Clock skewdetected.  Your build may beincomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3/main'
( cd run ; /bin/rm -f wrf.exe ; ln -s ../main/wrf.exe . )
if [ 0 -eq 1 ] ; then \
     ( cd main ; make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys-I/home/lixf/soft/WRFV3/chem -I/home/lixf/soft/WRFV3/inc-I/opt/netcdf/4.1.3/pgi/include " SOLVER=em em_wrf_SST_ESMF ) ; \
    fi
build started:   Thu Dec 12 19:00:09 CST2013
build completed: Thu Dec 12 19:00:13 CST 2013
--------------------------------------
( cd main ; make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame -I/home/lixf/soft/WRFV3/share-I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include " SOLVER=emIDEAL_CASE=real em_real )
make[1]: Entering directory `/home/lixf/soft/WRFV3/main'
make[1]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
( cd ../dyn_em ;  make -i -rmodule_initialize_real.o )
make[2]: Entering directory `/home/lixf/soft/WRFV3/dyn_em'
make[2]: Warning: File `../configure.wrf' has modification time 1.2e+02 s inthe future
make[2]: `module_initialize_real.o' is up to date.
make[2]: warning:  Clock skewdetected.  Your build may beincomplete.
make[2]: Leaving directory `/home/lixf/soft/WRFV3/dyn_em'
ranlib libwrflib.a
mpif90  -o real.exe  -O3  -w-Mfree -byteswapio     real_em.o../dyn_em/module_initialize_real.o libwrflib.a/home/lixf/soft/WRFV3/external/fftpack/fftpack5/libfftpack.a/home/lixf/soft/WRFV3/external/io_grib1/libio_grib1.a/home/lixf/soft/WRFV3/external/io_grib_share/libio_grib_share.a /home/lixf/soft/WRFV3/external/io_int/libwrfio_int.a-L/home/lixf/soft/WRFV3/external/esmf_time_f90 -lesmf_time/home/lixf/soft/WRFV3/external/RSL_LITE/librsl_lite.a/home/lixf/soft/WRFV3/frame/module_internal_header_util.o/home/lixf/soft/WRFV3/frame/pack_utils.o -L/home/lixf/soft/WRFV3/external/io_netcdf -lwrfio_nf-L/opt/netcdf/4.1.3/pgi/lib -lnetcdff -lnetcdf     
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[1]: [em_real] Error 127 (ignored)
mpif90  -o ndown.exe  -O3  -w-Mfree -byteswapio     ndown_em.o  ../dyn_em/module_initialize_real.olibwrflib.a /home/lixf/soft/WRFV3/external/fftpack/fftpack5/libfftpack.a/home/lixf/soft/WRFV3/external/io_grib1/libio_grib1.a /home/lixf/soft/WRFV3/external/io_grib_share/libio_grib_share.a/home/lixf/soft/WRFV3/external/io_int/libwrfio_int.a-L/home/lixf/soft/WRFV3/external/esmf_time_f90 -lesmf_time/home/lixf/soft/WRFV3/external/RSL_LITE/librsl_lite.a/home/lixf/soft/WRFV3/frame/module_internal_header_util.o/home/lixf/soft/WRFV3/frame/pack_utils.o -L/home/lixf/soft/WRFV3/external/io_netcdf -lwrfio_nf-L/opt/netcdf/4.1.3/pgi/lib -lnetcdff -lnetcdf     
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[1]: [em_real] Error 127 (ignored)
mpif90  -o nup.exe  -O3  -w-Mfree -byteswapio     nup_em.o  ../dyn_em/module_initialize_real.olibwrflib.a /home/lixf/soft/WRFV3/external/fftpack/fftpack5/libfftpack.a/home/lixf/soft/WRFV3/external/io_grib1/libio_grib1.a/home/lixf/soft/WRFV3/external/io_grib_share/libio_grib_share.a/home/lixf/soft/WRFV3/external/io_int/libwrfio_int.a-L/home/lixf/soft/WRFV3/external/esmf_time_f90 -lesmf_time/home/lixf/soft/WRFV3/external/RSL_LITE/librsl_lite.a /home/lixf/soft/WRFV3/frame/module_internal_header_util.o/home/lixf/soft/WRFV3/frame/pack_utils.o -L/home/lixf/soft/WRFV3/external/io_netcdf -lwrfio_nf-L/opt/netcdf/4.1.3/pgi/lib -lnetcdff -lnetcdf     
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[1]: [em_real] Error 127 (ignored)
mpif90  -o tc.exe  -O3  -w-Mfree -byteswapio     tc_em.o  ../dyn_em/module_initialize_real.olibwrflib.a /home/lixf/soft/WRFV3/external/fftpack/fftpack5/libfftpack.a/home/lixf/soft/WRFV3/external/io_grib1/libio_grib1.a/home/lixf/soft/WRFV3/external/io_grib_share/libio_grib_share.a/home/lixf/soft/WRFV3/external/io_int/libwrfio_int.a-L/home/lixf/soft/WRFV3/external/esmf_time_f90 -lesmf_time /home/lixf/soft/WRFV3/external/RSL_LITE/librsl_lite.a/home/lixf/soft/WRFV3/frame/module_internal_header_util.o/home/lixf/soft/WRFV3/frame/pack_utils.o -L/home/lixf/soft/WRFV3/external/io_netcdf -lwrfio_nf-L/opt/netcdf/4.1.3/pgi/lib -lnetcdff -lnetcdf     
mpif90: error while loading shared libraries: libimf.so: cannot open sharedobject file: No such file or directory
make[1]: [em_real] Error 127 (ignored)
make[1]: warning:  Clock skewdetected.  Your build may beincomplete.
make[1]: Leaving directory `/home/lixf/soft/WRFV3/main'
( cd test/em_real ; /bin/rm -f wrf.exe ; ln -s ../../main/wrf.exe . )
if [ 0 -eq 1 ] ; then \
     ( cd main ; make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm  -module /home/lixf/soft/WRFV3/main-I/home/lixf/soft/WRFV3/external/esmf_time_f90 -I/home/lixf/soft/WRFV3/main -I/home/lixf/soft/WRFV3/external/io_netcdf-I/home/lixf/soft/WRFV3/external/io_int -I/home/lixf/soft/WRFV3/frame-I/home/lixf/soft/WRFV3/share -I/home/lixf/soft/WRFV3/phys -I/home/lixf/soft/WRFV3/chem-I/home/lixf/soft/WRFV3/inc -I/opt/netcdf/4.1.3/pgi/include " SOLVER=emIDEAL_CASE=real em_wrf_SST_ESMF ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f wrf.exe ; ln -s ../../main/wrf.exe .) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f wrf_SST_ESMF.exe ; ln -s../../main/wrf_SST_ESMF.exe . ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f real.exe ; ln -s ../../main/real.exe. ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f README.namelist ; ln -s../../run/README.namelist . ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f ETAMPNEW_DATA.expanded_rain ETAMPNEW_DATARRTM_DATA RRTMG_LW_DATA RRTMG_SW_DATA ; \
               ln -sf../../run/ETAMPNEW_DATA . ;                     \
               ln -sf../../run/ETAMPNEW_DATA.expanded_rain . ;                      \
               ln -sf ../../run/RRTM_DATA. ;                          \
               ln -sf../../run/RRTMG_LW_DATA . ;                     \
               ln -sf../../run/RRTMG_SW_DATA . ;                     \
               ln -sf../../run/CAM_ABS_DATA . ;                      \
               ln -sf ../../run/CAM_AEROPT_DATA .;                    \
               ln -sf../../run/ozone.formatted . ;                   \
               ln -sf../../run/ozone_lat.formatted . ;               \
               ln -sf../../run/ozone_plev.formatted . ;              \
               if [ 4 -eq 8 ] ; then                        \
                  ln -sf../../run/ETAMPNEW_DATA_DBL ETAMPNEW_DATA ;  \
                  ln -sf../../run/ETAMPNEW_DATA.expanded_rain_DBL ETAMPNEW_DATA.expanded_rain ;   \
                  ln -sf../../run/RRTM_DATA_DBL RRTM_DATA        ;   \
                  ln -sf../../run/RRTMG_LW_DATA_DBL RRTMG_LW_DATA ;  \
                  ln -sf../../run/RRTMG_SW_DATA_DBL RRTMG_SW_DATA ;  \
               fi ) ; \
      ( cdtest/em_esmf_exp ; /bin/rm -f GENPARM.TBL ; ln -s ../../run/GENPARM.TBL . ) ;\
     ( cd test/em_esmf_exp ; /bin/rm -f LANDUSE.TBL ; ln -s../../run/LANDUSE.TBL . ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f SOILPARM.TBL ; ln -s../../run/SOILPARM.TBL . ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f URBPARM.TBL ; ln -s../../run/URBPARM.TBL . ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f VEGPARM.TBL ; ln -s../../run/VEGPARM.TBL . ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f MPTABLE.TBL ; ln -s ../../run/MPTABLE.TBL. ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f tr49t67 ; ln -s ../../run/tr49t67 . ); \
     ( cd test/em_esmf_exp ; /bin/rm -f tr49t85 ; ln -s ../../run/tr49t85 . ); \
     ( cd test/em_esmf_exp ; /bin/rm -f tr67t85 ; ln -s ../../run/tr67t85 . ); \
     ( cd test/em_esmf_exp ; /bin/rm -f gribmap.txt ; ln -s../../run/gribmap.txt . ) ; \
     ( cd test/em_esmf_exp ; /bin/rm -f grib2map.tbl ; ln -s../../run/grib2map.tbl . ) ; \
    fi
( cd test/em_real ; /bin/rm -f real.exe ; ln -s ../../main/real.exe . )
( cd test/em_real ; /bin/rm -f tc.exe ; ln -s ../../main/tc.exe . )
( cd test/em_real ; /bin/rm -f ndown.exe ; ln -s ../../main/ndown.exe . )
( cd test/em_real ; /bin/rm -f nup.exe ; ln -s ../../main/nup.exe . )
( cd test/em_real ; /bin/rm -f README.namelist ; ln -s../../run/README.namelist . )
( cd test/em_real ; /bin/rm -f ETAMPNEW_DATA.expanded_rain ETAMPNEW_DATARRTM_DATA RRTMG_LW_DATA RRTMG_SW_DATA ;   \
             ln -sf../../run/ETAMPNEW_DATA . ;                    \
             ln -sf ../../run/ETAMPNEW_DATA.expanded_rain. ;                     \
             ln -sf ../../run/RRTM_DATA .;                         \
             ln -sf../../run/RRTMG_LW_DATA . ;                     \
             ln -sf../../run/RRTMG_SW_DATA . ;                      \
             ln -sf../../run/CAM_ABS_DATA . ;                         \
             ln -sf../../run/CAM_AEROPT_DATA . ;                         \
             ln -sf../../run/ozone.formatted . ;                         \
             ln -sf ../../run/ozone_lat.formatted. ;                         \
             ln -sf../../run/ozone_plev.formatted . ;                         \
             if [ 4 -eq 8 ] ; then                       \
                ln -sf../../run/ETAMPNEW_DATA_DBL ETAMPNEW_DATA ; \
                ln -sf../../run/ETAMPNEW_DATA.expanded_rain_DBL ETAMPNEW_DATA.expanded_rain ;   \
                ln -sf../../run/RRTM_DATA_DBL RRTM_DATA ;         \
                ln -sf../../run/RRTMG_LW_DATA_DBL RRTMG_LW_DATA ; \
                ln -sf ../../run/RRTMG_SW_DATA_DBLRRTMG_SW_DATA ;  \
             fi )
( cd test/em_real ; /bin/rm -f GENPARM.TBL ; ln -s ../../run/GENPARM.TBL .)
( cd test/em_real ; /bin/rm -f LANDUSE.TBL ; ln -s ../../run/LANDUSE.TBL .)
( cd test/em_real ; /bin/rm -f SOILPARM.TBL ; ln -s ../../run/SOILPARM.TBL .)
( cd test/em_real ; /bin/rm -f URBPARM.TBL ; ln -s ../../run/URBPARM.TBL .)
( cd test/em_real ; /bin/rm -f VEGPARM.TBL ; ln -s ../../run/VEGPARM.TBL .)
( cd test/em_real ; /bin/rm -f MPTABLE.TBL ; ln -s ../../run/MPTABLE.TBL .)
( cd test/em_real ; /bin/rm -f tr49t67 ; ln -s ../../run/tr49t67 . )
( cd test/em_real ; /bin/rm -f tr49t85 ; ln -s ../../run/tr49t85 . )
( cd test/em_real ; /bin/rm -f tr67t85 ; ln -s ../../run/tr67t85 . )
( cd test/em_real ; /bin/rm -f gribmap.txt ; ln -s ../../run/gribmap.txt .)
( cd test/em_real ; /bin/rm -f grib2map.tbl ; ln -s ../../run/grib2map.tbl .)
( cd run ; /bin/rm -f real.exe ; ln -s ../main/real.exe . )
( cd run ; /bin/rm -f tc.exe ; ln -s ../main/tc.exe . )
( cd run ; /bin/rm -f ndown.exe ; ln -s ../main/ndown.exe . )
( cd run ; /bin/rm -f nup.exe ; ln -s ../main/nup.exe . )
( cd run ; if test -f namelist.input ; then \
        /bin/cp -f namelist.inputnamelist.input.backup ; fi ; \
        /bin/rm -f namelist.input ; ln -s../test/em_real/namelist.input . )
build started:   Thu Dec 12 19:00:09 CST2013
build completed: Thu Dec 12 19:00:14 CST 2013
make: warning:  Clock skew detected.  Your build may be incomplete.

green_tea789

你这样贴得太多了。用./compile em_real >pp
pp是任意文件名
然后屏幕就可以看到编译错误了。

木子肃文

green_tea789 发表于 2013-12-12 23:01

                               
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你这样贴得太多了。用./compile em_real >pp
pp是任意文件名
然后屏幕就可以看到编译错误了。

这个我知道啊，上步错误已经好了，现在是在装WPS的时候有一个.exe没生成，报错是PGC-F-0206-Can't find include file jasper/jasper.h (dec_jpeg2000.c: 5)PGC/x86-64 Linux 10.6-0: compilation aborted，但是jasper我已经安装好了，望求教

green_tea789

要不用sudo试试？

木子肃文

green_tea789 发表于 2013-12-13 14:41

                               
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要不用sudo试试？

问题找到了，是我的jasper环境变量没设对

839168298

。。。。萧菲。。。

diandian

你好！我安装Jasper，在编译WPS时没生成ungrib。exe，感觉Jasper环境变量错了，你可以把你的环境变量发给我看看么？谢谢了

小宝

求问。我compile的时候也遇到跟你一样的问题，说None of WRF_EM_CORE。
请问你是怎么解决的啊？

librapig

同样的问题，求解答

流浪汉568

木子肃文 发表于 2013-12-13 14:48
问题找到了，是我的jasper环境变量没设对

应该如何改 求指教